Sphaerodactylus townsendi (Townsend's least gecko): 125443748
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Entry
125443748 CDS
T08213
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125443748 (PKD1L2)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125443748 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
REJ
Gal_Lectin
Lectin_C
Ion_trans
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
125443748
NCBI-ProteinID:
XP_048372005
LinkDB
All DBs
Position
LG14:complement(5965440..6018244)
Genome browser
AA seq
2362 aa
AA seq
DB search
MWILIATFSSLFLCSNTEELSLAEGTPCSKYQVAFNHSCYEIVRLQRSFANAQSWCERGG
GHLVFIENEETQKFLEDQITEDKEWWIGITYSSSLNETTEGTIVWLDTSNITYSKWHQDP
PLVLPSACGYILKNSGYEWSITENCSQEFDFICEFESGHSMACDNFNATVQCGSGDVIQV
GDSFYGRKTPHYCVLETPLQFDVEEECSWISIKDEVAGQCHGLQACQVAADGTFFGDPCP
GLGSYLSIQYHCMEGLQLAVAESSFVFENITISFKWLLTPYSGNLSCIISTGDGNTIDPY
YPPTSFSNVTYNYDSPGEFTIFVECTTSEWHVTAQTLITIQDKMDELIVIGCFSAFEAGN
SSCCRTLYEETLWIQVTLNGGSGVTYSIVADNKTLMESSVKAGTIPHNLTLDVTSQQLLG
PGVHHLKIFASSNTTEAEISEGLTIHLVEPVTGLQAMLSSNSMKLGEDLEITVSAPHGQP
EKLRFEVIGSNETFSHLKDGPEGENKTYKIPVKSEGVFVVKLLAMNAFSNMSIDVGTVTV
SSNSSEPFEDKVETDINGKMRTDSNWKKRMYIKPSRHAGIFATVILGWPEDDNTSLYSWS
CGHCWPEWTECVQQRSILVDQREIQIPPACLPPPSSAVTVKLTVQTPGKETKKDEQCLYL
TAKQELSLQISCNTNCKPVNISEDVMLRVSAGTDSKDTLYTWYLDNTFLRKPSPLPPGCN
LNGFRQSNLTLLQSNSTVLVLNSSFLQTQGEAFRIKATATSEHKYGEATYILSTVPPPAV
PVCAVSPKQGSVLTLFSISCHPPCLEDQCGPLDTSPLTYCFYLEPNSLLHCGQDPHLTSV
YLPLGEEDNNFLLHIIIAVSNSYGDNVHTKATVRVQYEDIHTGNQTLQAILSEKSSTILK
GENNSMSLFQLYKSVSSVLNQETKEESVNSSLRTDTRKELRELMLTTLSAVNVTSMQTAL
KMSEVLKEITYRSEELSSSAQVEAGNTLKDVSESLLIVTPEDGEDDQKRKDAASYLFNAV
NNVLEATVQNGTEEASVPESKQSLVSQQLLTTVDNLQSALLIGKLPDDEPTVLTAPSVAM
YINRLQTDDVDSTSINIANSSTASFTLPSASSLSISGASDETVDIRMVSFSVNPFSSTDS
FDIHGTVGGLTLTSLDGLVIPVRNLTEDIEILLPRSLDIQEDLSMLNLGNFSALQVNVTS
ANTSLVIHLELDQDVPLILYLGYGYQPNESEHDFIAHVAFDRNARDMVYSWILHPEDLIF
GEGTYYFIVRAETELGPVDLSDINLSITCFVSQCVFWDEQQGNWNSYGCHVGPKTTPSRT
QCLCNHLTFFGSSFFIMPNTVDISKTVELFATFVDNPVVVTTVGCIFLVYLLVLIWARRK
DIQDNAKVKITVLADNDPFAQYRYLVTVFTGHRRGAATTAQTSKGFQDGHIWYSIFSRSP
RSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPADQKMDLGKIEFTWQEVMIGFESSLL
MFPINLLIVQIFRNIRPRPNREKKPGKSGRVSPSLSPPPHQAAQSMSLTPEAVIKDIRRI
ANSLFKTLGAPFPSLEPDLGKSTDINKLLALVEDIICQQNRIGQEFYDESKKKDDPIIIT
LGLVDLQEKTRSPTPERGMGERLKHRDYNRCLYMQLQNVEMELQLLGAHRFQNPKSYSQA
VRQVQHMKDFLESQLCPAASTSERGSPTPSLLGEDKKEPAPKGLPWWCVFIGWFLVAITS
GVSGFFTMLYGLHYGKENSIKWLISTAISFFESLFITQPLKVLGFAAFFALVLKKMEQED
EENTAIDAPLSAPGDSNPLFGARRDSGSNIYQPPPLTDIEKMKSNRLKEQKAFALIRGIF
AYLGFLWMLLLVAYGQRDPNSYYLNKHIESSFTDGFQDIFSYQDFFKWARTTLVSSLYGP
YQGFITDGNSKLVGSARIRQVRVKGHTCPIDPQLRLTVQECHASYSFDAEDASDYGERWN
ISSTANSSELSSAWQYQSQSKLRGHPIWGKLAVYRGGGYVVHLGTDSHNASRILQYLFDN
IWLDTFTRAVFVEFTVYNANVNLFCIVSLMFETNALGAFFTRAELQSIRLYTYTDGLHIF
VVAAEVIYFLFVIYYMVVQGKLMRALKWNYFRSKWNLLELAIICISWSALIVFTRRTILG
LRDISYYQEHKDEFVSFNQTATVDAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLQ
RAWGDISGFATVIIIMFLAYSIATNLIYGWKLNSYKTLFDSAETMVSLQLGIFNYEEVLD
YNPILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQASDEEEIVDLIVMKICSFL
GIKCKTDPKSACDKLLEEPATN
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctcatcgcaaccttttcttctctcttcctctgctcaaacacagaagagttg
tcccttgcagaggggactccttgttcaaagtatcaagtggctttcaaccattcatgctat
gagattgtgaggctccagcgctctttcgcgaacgcccagagctggtgcgagagaggaggg
ggccatctggtctttattgaaaatgaagaaactcaaaagttcttggaggaccagatcaca
gaggataaggaatggtggatcgggataacctacagttcctctttgaacgaaacgacggaa
ggtaccatagtgtggctggacacctccaacatcacttacagcaagtggcatcaagacccg
cccttggtcctcccttctgcatgcggctatatcttgaagaactctggctatgagtggagc
atcacagaaaactgcagccaagagtttgacttcatctgtgaatttgagtcaggccatagt
atggcttgtgacaactttaatgccacagtacaatgtggatcaggagacgtgattcaagtt
ggggacagtttctacggacgaaaaactccccactactgcgtactggagactcccctgcag
tttgatgtggaagaagaatgtagctggatcagcataaaggatgaagttgcagggcaatgt
catgggctccaagcttgtcaagtagcagctgatgggaccttttttggagatccttgtcca
ggtttgggaagctacctgtctattcagtaccactgcatggaaggcttgcaactggcggtg
gcagagagcagcttcgtcttcgagaatatcaccatctcatttaaatggcttcttacacct
tactctggcaacctctcatgcatcattagcaccggagatggaaacacaattgatccttac
tacccgccaacttcatttagcaacgtgacctacaactacgattctccaggtgaattcacc
atctttgtggaatgcaccaccagtgaatggcatgtgacagcccaaacgcttataaccatc
caggataaaatggacgaacttattgtcattggctgtttcagtgctttcgaagctgggaac
agctcttgttgcagaactctttatgaagaaacattatggatccaagtgacacttaatgga
ggtagtggggtgacttactccatagtagcagataacaaaacactgatggagtccagtgtc
aaagcaggaaccattcctcacaacctgaccttggatgtcacatctcaacagttgcttggt
cccggggtacatcacctcaaaatctttgcctccagcaacaccaccgaagcagaaatttca
gaaggcctcaccattcatttagttgaaccagtcaccggtcttcaagcaatgctaagctcc
aactctatgaaattaggagaagatctggagataacggtctctgcacctcatgggcaacct
gaaaagctgaggtttgaggtgattggatcaaatgaaaccttttctcacttgaaggatggt
cctgaaggagaaaacaaaacctacaagattccagtgaaatctgaaggtgtcttcgtagtc
aagctgcttgctatgaatgccttctcgaatatgagcatcgacgtaggcacggtcaccgtc
tcgtccaacagctctgaaccttttgaggacaaagtggaaaccgacatcaatggcaaaatg
agaactgacagcaactggaaaaagcgaatgtacattaagcccagccgtcatgctggtatc
tttgccacagttattcttggctggcctgaagacgacaacacctctctttactcatggtct
tgtggacactgctggcctgagtggacggaatgcgttcaacagcgatccatcctcgttgac
caaagagaaatacagatcccacccgcctgcttgcctcctcccagttctgcagtaactgtg
aaacttacagttcagaccccagggaaagaaaccaagaaggatgagcaatgcctttacttg
acagcaaaacaagagctgagcctccaaatcagctgcaatacgaactgcaagccagtaaat
atttctgaagatgtcatgcttagagtctctgcagggacagactcaaaagatactctctac
acatggtacttagacaatacgttcctcagaaagcccagtccgcttccaccaggatgtaac
ttgaatggcttccggcagagcaacctgaccttgcttcagagcaattcgacagtgttggtg
ttgaacagctcctttctgcaaacacaaggagaagccttcagaattaaagctacagcaaca
agtgaacacaaatatggtgaagcaacttatattctgagcactgtgcctccccctgcagtt
ccagtatgtgctgtatcccctaagcaaggatcagtgctaactctcttctccatctcctgc
caccctccctgcctggaggaccagtgtggtccattggacacctccccactgacatactgt
ttctacctggagccaaattctctcttgcactgtggtcaagaccctcacctaacttcagtt
tacctcccactcggagaagaggacaataacttccttttacatataatcattgctgtgagt
aacagctatggggacaacgtccacacgaaggccacagtcagggttcaatatgaagatatt
cacactgggaaccagaccctccaggccattttatcagaaaaatcaagcactatcctgaaa
ggagagaacaacagcatgtccctgttccagctgtacaagtcagtatcgtcggtcctcaat
caagagacgaaggaagagagtgtcaattcatctctgcggacagatacacggaaagagctg
agagagttaatgttgaccactctatcagctgtcaacgtaacatccatgcagacagctctc
aagatgtccgaggtgctcaaagaaatcacatataggagcgaagagctttcgtcctctgct
caggtagaagctggtaatactctgaaggatgtgagtgaatccttgctgattgtcacccct
gaagatggagaggacgaccagaagcgcaaggatgctgcctcctacctgttcaacgcagtg
aacaatgttctcgaagctactgtgcagaatgggacagaggaggcttctgtcccagagtct
aaacagagcttggtgtcccagcaactactgaccactgtggacaacctccagagtgccctc
ctcatcgggaaactgcctgatgatgaacccacagtgctaacagcgccctctgtggccatg
tacatcaacaggttgcagacagatgatgtggacagcacatccattaatatcgccaactct
agcacagctagcttcaccctaccttccgcctcttctctcagcatctcaggagccagtgat
gagacagtggatatccggatggtgagcttctctgtgaatcccttttcctcaactgacagc
tttgatattcatggaactgtgggaggtctcactctcaccagcctagatgggttggtcatt
ccagttaggaaccttacagaagatattgagatactgctgccaaggagtctggacattcaa
gaagacctaagcatgttgaatctgggaaacttcagtgctctccaagtcaatgtgacctca
gcaaatacatctctagtaattcatctggagctggaccaagatgttccactaatcttgtac
ctgggatatggctatcaacccaatgagtctgagcatgatttcatagcacatgttgctttt
gacagaaacgctagagatatggtatattcttggattcttcatccggaagacctcattttt
ggagaaggaacttattatttcatagtgagagcagaaacagaacttgggccggtagacctc
agtgacataaacctctccatcacttgctttgtatcccagtgtgtattctgggatgagcag
caaggaaattggaatagctacggatgccatgttggccccaaaaccacccccagccgcacc
cagtgtctctgtaaccacctgacattctttgggagctctttcttcattatgcccaacaca
gttgacatcagcaaaactgtggagttgtttgccacgttcgtggacaatcccgtagtcgtg
acgactgtaggctgcatcttccttgtgtacctgctggttctgatctgggctagaagaaaa
gacatccaagataatgccaaagtgaaaataacggtgctggcggacaatgatccctttgct
cagtatcggtatctggtgactgtttttacgggacaccgtcgaggggcagctacaaccgcc
cagacctccaaaggcttccaagatggacatatctggtattccatcttcagccgctctcct
cgcagcagcttcacccgagcccagcgggtgtcctgctgcttctcgctccttctgtgcacc
atgttgaccagcatcatgttctggggggtgccgaaggatccggcagaccagaaaatggat
ttaggtaagatagagttcacgtggcaagaggtgatgattggcttcgagagctccctcctc
atgttccccatcaacctgctcatcgtgcagatcttcagaaacatccgtcctcggcctaac
agagagaagaagccagggaaaagtgggcgagtatcccccagtctatctcctcctccccat
caggctgcccagagcatgtcacttactcctgaagctgtgatcaaggacatcaggcgaatt
gccaactccctcttcaagaccctcggagctcccttcccttccttggagcctgatttgggg
aaatctaccgacatcaacaagcttttggccttagtggaagacattatctgtcagcagaac
agaattggacaggaattttatgacgagagcaagaagaaagatgacccaattatcattact
ctcggcttggtggatttacaagaaaagaccaggagcccaacgccagagagagggatgggt
gaaaggctgaaacaccgagactacaaccgttgcctctacatgcagctgcagaacgtggag
atggaactgcaactcctgggggctcaccgattccagaacccaaaaagctattcccaggct
gttcgccaggttcagcatatgaaggacttcctggaaagtcaactctgccctgcagcatcc
accagtgagaggggctcacctactcccagccttctgggagaggataagaaggagccagca
cccaaaggcctgccttggtggtgtgtgttcattggctggttcctggttgccatcactagt
ggtgtatctggattcttcacgatgctttatgggctccattatggcaaggagaattccatc
aaatggctgatctccacagccatctctttctttgaaagccttttcattacacaaccactg
aaggtactaggatttgctgctttctttgctctggttctgaaaaaaatggaacaggaagat
gaggagaatacagccattgatgcacctctctctgccccaggtgactcaaaccctctcttc
ggagcccgcagagacagcggaagcaacatctaccagcctccccctctgaccgacattgag
aagatgaagagcaaccgcctgaaggagcagaaagcatttgccctgattcgtggaatattt
gcctatttgggtttcttgtggatgttgttgttggttgcctatggccagcgtgatcctaac
tcctattacctcaacaaacatattgagagtagcttcactgatggcttccaagatattttc
agctatcaggatttcttcaagtgggccaggacaacattagtcagcagtttatacggccca
tatcaaggcttcatcacagatggcaactccaagctggtgggaagtgctcggattcgtcaa
gtgagggtgaagggccacacctgccccatagaccctcagctgcggctgaccgttcaagaa
tgccacgcctcttattcttttgatgcggaagacgcatcagactacggggaacgctggaac
atctcttccacagcgaattcttcggagttgagttctgcctggcaatatcagagccaatcc
aaactgagagggcatccaatctgggggaaactggcagtctacagaggtggaggatatgtg
gttcacctggggactgactcccataatgcttccagaattctccagtacctcttcgacaac
atctggctggacacttttacgagagctgtgtttgtcgagttcactgtctacaatgccaat
gtgaacctgttctgcatcgtaagcctcatgtttgaaaccaatgcattaggagccttcttc
acacgggcggagctgcagagcatccggctttatacgtacacagatggtcttcatatcttt
gtggtagcagcggaagtgatttatttcctgtttgtcatctactacatggtggtccaggga
aagctcatgcgagctctgaaatggaactacttccgcagcaagtggaacctgctggaactg
gccatcatctgcatcagctggagcgcactgatagtatttacacgacggactatcctgggt
ttacgggacatcagctactaccaggagcataaggatgagttcgtgagcttcaatcaaaca
gcaaccgtagatgcagttctgggctacctgattgctttcttggtgcttctctccacggtg
aagctgtggcacctcttgaggctgaatcccaaactgaacatgatcacctccaccctacag
agggcctggggggacatctcaggatttgccactgtgattatcatcatgttcctcgcctac
tccatagctacaaacttgatctatggctggaagctgaattcatacaaaaccctctttgat
tcagcagagaccatggtcagccttcagttaggaatcttcaactatgaagaggtcctggat
tacaatcccattttgggttccttcttaattggctcgtgcatcattttcatgacctttgtg
gtgctgaatctgttcatttcagtgatccttgtcgctttcagtgaggagcaaaagcattac
caggcttcagatgaggaagagattgttgatctgattgtgatgaaaatctgcagcttcctt
ggaattaaatgcaaaactgatcctaaatcagcctgtgacaagctgctagaagaacctgca
accaactaa
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