Sphaerodactylus townsendi (Townsend's least gecko): 125444497
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Entry
125444497 CDS
T08213
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125444497 (GIGYF1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125444497 (GIGYF1)
Surveillance factors
Other surveillance factors
125444497 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
125444497
NCBI-ProteinID:
XP_048372901
LinkDB
All DBs
Position
LG15:complement(39289581..39310039)
Genome browser
AA seq
943 aa
AA seq
DB search
MAAETLNFGPEWLRALSGGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKENKSPEEI
QDKEFSAVLQDDPLQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGSGATPVGVSRGRGS
ARSRGRGRGESGFYQRSVEEAEGAFGRGSGREIHRSQSWDDRGERRFEKPIRREGARAPF
EEGVPPGRKDFARSDSDNWRTLREEHEGEEETAAAAAAGSGGSWRQSGGTRRENERWRSA
SPDGGPRSAGWREHGGEGRRRKFDFDFRDREDEPRSGRRHRQNSDSFEEDKDGLPEWCLE
DEEEEMGTFDSSGAFMPLKKSPKEPILEDQELNFLPLQEEDEEEEEDLLEAKDSEKGESG
NGPVAPPLKEGGERERMELQLVPDEKPAAPPGALWRSGPPFSTAADAAPMGECEGAVPGP
VSKAEGSVAAAGCIKDMETSNGAPGMLSHPARISSAAGPAISSSTAVTAAATEFTVGDNE
DEDGMKHLQQEAEKMVASLQDSSLEEEHFTQAIGDHRNTAAALPLSHEAAMKWFYKDPQG
EIQGPFATQEMAEWFQAGYFTMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLV
RRERATGVLKVLAEGQGPDWAKPGLAHLRPHHKRPFGAALKQSVTREGNMDQERLKKQQE
LATATLYQQLQHQQLLQLANSRQQYAQCSLQQKVASGDLTQQQLTTFLQQLQALKPRAGE
QGMIPSLNRSVSVPDTGSLWDTHTSASSQAGGEANLWDIPISSSTQGPILEQLQLQHKLQ
ERRGAELRAKRDEDERKRRREEEELFRRKQLPSSSSWGQQSVNSSASTQNSFSLADIQKL
GDARACRELREECRQQELLLKLLQQQNSHPLWGGLAKQNVSMKALQDLQQETERHMQKQQ
RAQQRVHGGHSLNSLPTQWGVDSSPLWGGHEKSGSLSLWEESV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgagacactgaactttgggccagagtggcttcgtgcgctctctggtggcggg
agcgtcacttcccctccaccttcccctgccatgccaaagtacaaactagccgagtaccga
tatgggcgggaagagatgttagcactttacgtcaaggagaacaagtccccagaagaaatc
caagataaagagttctctgctgttctccaggacgatcctctgcagccgctggcattggtg
ccattaacagaggaggagcagaggaatttctccatgtctgtgaacagtgttgcagtgctg
aggctgatgggaaaggggagtggggctaccccagtgggcgtctcccgtgggagaggcagc
gcacggagccgaggccgaggccggggcgaaagcggcttttaccaaagaagcgtagaggag
gcagaaggagcgtttggtcgtggaagcggccgggagatccaccgcagccagagctgggat
gaccgaggagaacgtaggttcgagaagcccatccgcagggaaggagctcgggccccattc
gaagagggagtccccccagggcgcaaagactttgcccgttcggacagcgacaactggcgc
accctgcgggaggagcacgagggcgaggaggagacggctgctgctgctgctgcgggctca
gggggcagctggcggcagagcggaggaacccggcgcgagaacgagcgctggcggtcggcc
agcccagatggggggcctcggtcggccgggtggcgtgaacacggtggagaagggcgccgg
cggaagtttgacttcgacttccgggaccgagaggacgagccccggagcgggcgccgccac
cgccagaacagcgacagctttgaagaggacaaagacggcctgccagagtggtgtctggaa
gacgaggaggaggagatggggacgtttgactcctccggggccttcatgcctcttaagaag
agccccaaagagcccatcctggaggaccaggagctgaatttccttcccctgcaagaggag
gacgaggaggaggaggaggacctgctggaggccaaggacagcgagaagggagagagcggc
aacggccctgttgctcccccactcaaggaagggggagagagagagcggatggagcttcag
ctcgtgcctgacgagaaaccagcggctcctccgggggccctgtggcgctccggcccccct
ttctccacggctgccgatgctgctcccatgggtgaatgcgagggggccgtgccggggccc
gtctccaaagcagaggggtcggtggcggcggctggatgcatcaaggacatggaaacttca
aatggagctccaggcatgctgagccacccggctcgtatcagctctgcggcagggccggcc
atttcctcgtccacagctgttactgctgctgcgactgaattcacagttggggacaacgag
gacgaggatggaatgaagcatctgcagcaggaagcagaaaagatggtggcttccttgcaa
gacagctccctggaggaagagcacttcacgcaggccatcggggaccaccgcaacactgcc
gcggccctgcccctctcccacgaagctgccatgaagtggttctacaaggacccgcaaggg
gagatccaaggccctttcgccacccaagagatggccgagtggttccaggccggctacttc
accatgtccctgctggtgaagcgaggctgtgacgagggcttccagcccctgggcgaagtc
ataaagatgtggggaagagtgccttttgctccgggcccgtcgccgcccccgttactggtg
aggagggagagggccacaggggtgctgaaggtgcttgcagagggacagggaccagactgg
gcaaagccggggctggcccacctgcgcccgcaccacaagcgcccatttggagcagcgctg
aagcagagcgtgacacgtgagggaaacatggaccaggagcgcctgaagaagcagcaggag
ctggccaccgccaccctctaccagcagctccagcaccagcagctgctccagctggccaac
agtaggcagcagtatgcccagtgttccctccagcagaaggtggcatcgggggacctgacg
cagcagcagctgaccaccttcctgcagcagctgcaggctctcaagcccagggctggagag
caggggatgatcccttctctgaaccgatcagtttctgtgccagacaccgggtccctgtgg
gacacacatacctcagcctcatcacaagcaggtggtgaagccaacttgtgggatattccc
attagttcttcaactcagggtccaatcttagaacaacttcaactgcagcataagctacag
gagcggagaggcgctgaactcagagccaagcgagacgaggatgagcgcaaacggcgccgc
gaggaagaggagctgttcaggcgcaagcagctgccgtcttcctcctcctggggccagcag
tcagtgaacagcagtgcctccacccagaacagcttcagcctggctgatattcagaagctg
ggagatgcccgggcgtgccgggagctacgggaggaatgccgtcagcaggagctgttgctg
aaactactgcagcagcagaattcgcacccgctctggggagggctggccaaacagaatgtc
tccatgaaggctttgcaggacctgcagcaagagacggagcggcacatgcagaagcagcag
cgggcgcagcagagagtgcatgggggccacagcctgaacagcctgcccactcagtgggga
gtggactcaagcccgctgtgggggggccacgagaaaagcggctccctcagcctctgggag
gagagtgtgtga
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