KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125444530
Entry
125444530         CDS       T08213                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013  Nucleocytoplasmic transport
stow03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125444530 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    125444530 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stow03019]
    125444530 (THOC6)
   03041 Spliceosome [BR:stow03041]
    125444530 (THOC6)
Messenger RNA biogenesis [BR:stow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     125444530 (THOC6)
Spliceosome [BR:stow03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    125444530 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_NOL10_N WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_WDR41 DSE1_N Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 WDR54 Beta-prop_EIPR1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SCAP GCK
Other DBs
NCBI-GeneID: 125444530
NCBI-ProteinID: XP_048372957
LinkDB
Position
LG15:complement(31131194..31143488)
AA seq 327 aa
MDIQRSLDLLHMTIYSQSISPCGKFLAAGNNFGEIAIFSLSAALSSEAKDESKKPVVSFA
AHDGPIYAMVSTDRQLLSAGNGEVKAWNWSEIVKKGCKEAWSRRPPYGSSLEVPEINSLQ
LNLKDNSLLMAGGDCAIHMMDLESGTFTHEYRGHTDYIHCLALRDQLRECLSGSEDGTVR
LWDLRSGGQVQCIEVHKYEECSRPQNGKWIRCLATDSDWMVCGGGPALTLWHLRSVTPTT
VFPLPQCQQQVTFYQDLILSAGHGPTINHLQISGEVKAQIPCTPSCIHSLSINEHSPEHK
VLTAAGSSHRIDVFTNFSYRAFSLVFT
NT seq 984 nt   +upstreamnt  +downstreamnt
atggatattcagcgctccctcgacctcttgcatatgactatctattctcagagcatctct
ccttgtggcaagttcttagctgccgggaacaactttggggagattgccatattcagcctc
tcggcagcattgagttcagaggccaaggatgagagtaagaagccagtggtatcctttgca
gcccacgacggtcccatctatgccatggtctccacagaccggcagttactgagtgctggt
aacggtgaagtcaaggcctggaactggagcgagattgtgaagaagggttgcaaggaagcc
tggagcaggaggccaccttacgggagcagcctggaggtgccagaaatcaacagccttcag
ctcaacctcaaggataacagtcttctaatggctggaggagattgtgctatccacatgatg
gatttggaatcgggaaccttcacccatgaatatcggggccacacggattacatccactgc
ctggcgcttcgggatcaacttcgagagtgcctgtcaggaagcgaggacggcaccgtgcgc
ctttgggatttgcgttccggaggtcaagtgcagtgcattgaagtgcataagtatgaggaa
tgcagccggccgcagaacgggaaatggatccgttgcctagcaacagactctgactggatg
gtgtgtggtgggggcccagcactcacgctgtggcaccttcggtctgtcacgcccaccacc
gtctttcccttgccgcagtgtcagcagcaggtcacgttctaccaggacctgatcctctct
gctggccacggcccgaccatcaaccacttgcagatcagcggggaagtgaaggcccagatc
ccctgcacccccagttgcatccactcgctttccatcaacgaacactcgccagagcacaag
gtgctcacagcagctggaagcagccaccggatcgacgtcttcaccaacttcagctaccga
gccttttctctcgtcttcacctag

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