Sphaerodactylus townsendi (Townsend's least gecko): 125444706
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Entry
125444706 CDS
T08213
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125444706 (CASC3)
03015 mRNA surveillance pathway
125444706 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125444706 (CASC3)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125444706 (CASC3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
125444706
NCBI-ProteinID:
XP_048373275
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Position
LG15:7746629..7768001
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AA seq
759 aa
AA seq
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MRRKGGMTETWAIHAGSCSCSGCRKRDFLTPNPSRASSSSASSFLVSPVEMADRRRQRAS
QDSSEEDESDSPPGSTAPSPRGTHRLGLAGGDAGEVANDHAEAENVEAAAEPATGGASPA
DSECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEETAKVDLKRDSNEVNELATKADKGD
EKPEPKGTVAGERQSGDGQESTEPTENKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHDL
RGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSSQNPDEV
KPRRIRKPRFGSPPQREPNWANERPGKPPRHQSLDSTPVPPRTFINRNSAGTGRMPLPRT
FPRPGGYKESRPSYRAVDVNSQRAPRFSEQSKHENNYRARRSEPVPAREPSPEAEATHIC
SSPVKKEEVLPEGPITPADTLQPPPDKPVEKKSYSRARRTRTKAGETGKLADEVPPPSGL
TPAPLKTVEVIPSSSSANTENWEVPVEASLDDLEQDISQMNITEQNWNQGQPQFMQPQGI
PNQMHIGAAPPPQFSRMEEMGVQGSRAKRYSSQRQRPVPEPAPPVHISIMEGHYYDTLPF
QGPIYTHSENPAPLPPQGVIVQPEMHLPHPGLHPHQAPAPLTNPGLYPPVSMPPGQQPPP
PPQQLLAPTYFSPPPGVMNFGSPGYPYPPGALPPPPPPHLYPNTQAQSQVYGGVTYYNTV
HQQVQPKPSPPRRTSQPVTIKPPPPEVVSRVPVNVSKRF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaaaggcgggatgactgaaacatgggcaattcatgccgggagttgtagttgt
tccggctgtcggaaaagagacttccttacccctaatccctcgcgcgcctcctcctcctca
gcgtcttcgtttcttgtttctcctgtcgaaatggcggaccgtcggcgacagcgcgcctcc
caggacagcagcgaagaggacgagtcggactcgccgcccgggagcaccgctccttccccg
cgcggcacccaccgtctcggcctagctgggggagacgccggggaggtcgcgaacgaccat
gccgaggccgagaacgtggaggcggccgctgagccggcgaccggtggagccagcccggcc
gactcggagtgtgaaagtgaagatggcatagaaggagatgctgttctgtctgactatgaa
agtgctgaagattctgagggtgaggagggggaatacagtgaggaagaaacagccaaagtg
gacctgaagcgggacagcaatgaagttaatgagttggcaacaaaggcagacaaaggggat
gaaaaaccagagccgaaaggcaccgtggctggcgagaggcaaagtggggacgggcaggaa
agtacggaaccaactgagaacaaggttggcaaaaaagttcccaaacacctggatgacgat
gaggaccgaaagaaccctgcgtacatacctcggaaaggcctcttttttgaacatgacctt
cgagggcagacccaggaagaagaagtccgccccaagggtcggcagcggaagctgtggaaa
gacgagggtcgatgggagcacgacaagttccgagaagacgagcaagctccgaaaaccagg
caggagttgattgcgctgtacgggtatgatatccgctcatctcagaaccctgatgaggtc
aagcccaggagaatacgcaagcccaggtttgggagtccacctcagagagagcctaattgg
gctaatgagcggccaggtaagccaccacgacaccagagccttgacagtaccccggtgcct
ccccggacgttcatcaaccgaaactctgcaggaacgggacggatgcctctgcctaggact
ttcccaagacctggtggctacaaagagtcccggccaagctatcgtgctgtggatgtaaac
agtcagcgtgcgcctcgtttcagtgagcaatcgaagcatgagaacaattaccgggccaga
cgctcagagccagtcccagcacgagagccttctcctgaggcggaggccacacacatttgc
agcagccctgttaaaaaggaagaggttcttccagaaggcccaattactcctgcagacact
ctgcagccacctcctgataagcctgtagaaaagaagtcctattctcgagccaggaggacc
cggaccaaagccggcgagacggggaaattggcagatgaagtcccaccaccatcagggttg
acccctgcaccgttgaaaactgtagaagtcataccatcctcttcatcagcaaacactgag
aattgggaggtacctgttgaagccagtctagatgatctggagcaagatatctcccaaatg
aatataacagaacaaaactggaaccagggacagccccaattcatgcaacctcagggtatt
cctaatcagatgcatatcggagcagccccacctcctcagttcagtcggatggaagagatg
ggagtccaggggagccgtgcaaagcgttactcatcacaacgccaaaggcctgtcccagag
cctgctccacccgtgcacatcagcataatggaagggcactactatgatacactgccattc
cagggtccaatctatacccacagtgagaaccctgctccgcttcctccccaaggggtgatt
gttcagcctgaaatgcatcttcctcatccagggttacatcctcaccaggcgcctgcccct
ttgactaaccccggcttgtatcctcccgtctctatgcctcctgggcagcagcccccacct
ccaccgcagcagctgttggcgcctacttacttctctcctcctccaggagtaatgaatttt
ggcagccctggttacccttacccgccaggagctctcccgccgcccccacctcctcatctg
tatcccaacactcaagcccagtctcaggtgtatggaggagtcacctattacaacacggtt
caccaacaggtccagccaaagccttctcctccccgaagaacctcccaacccgtcaccatc
aagccacctccccctgaggtggtaagcagggttcctgttaacgtttctaaacgcttttga
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