Sphaerodactylus townsendi (Townsend's least gecko): 125444865
Help
Entry
125444865 CDS
T08213
Symbol
DHX8
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125444865 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125444865 (DHX8)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125444865 (DHX8)
Spliceosome [BR:
stow03041
]
Complex C
Other components
Step II factors
125444865 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
S1
AAA_22
HA2_C
GIPC1_GH2
nSTAND3
AAA_19
T2SSE
AAA_16
ABC_tran
DEAD
OB_RRP5_4th
PhoH
Motif
Other DBs
NCBI-GeneID:
125444865
NCBI-ProteinID:
XP_048373553
LinkDB
All DBs
Position
LG15:2736919..2770837
Genome browser
AA seq
1120 aa
AA seq
DB search
MAEPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLLEKSPQPFGSIYRQALVK
NGAEFTDSLVSNLLRLIQTMRPPAKPSTSKNAPKPKTEKEKLKDLFPALCRPDNPTVRTM
LDEDDVKVAADALKELEALMPGTGDDTASXHSESTSRKRNEIRRRSRAGLKIATESLARD
RGNERNKEXIQSTARAEVXAGQQDESETGRRRRWWRWRDKHVDRPPPEEPSIGDIYNGKV
TSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTS
LSMKDVDQDTGEDLNPNRXRHLVGRGQLKESDHEGPSSRPAHSICVRSQAPXNYEATDAL
ERKRLTRISDPEKWEIKQMIAANVLSKEEFPXFSVEKAGILPKLTRXGKANLESELVEEE
EPTFSSKKHTTCLLFAWRLGQNPGSLSQAHAMMQAAALAKEKGRNXKNEGAGEAEMDSIP
MGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKGTSCDKRTQLSHHGG
TGQESSPSFPGXRIQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQP
RRVAAMSVAKRVSEEFGCCLGQEIVAMWIGWGPSWGNHLKPGGKDAASPSAPSIIFGLLK
KTVQKRPDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTLPSGDPLTEGEGDILVFLTGQ
EEIDTACEILYGRLKLKLGPGMPRHVHLILTGCFGECRQAQAKQRAGRAGRTGPGKCYRL
YTERAYADRRCAPTLKHVPRSKGPGLASTVHNKGGAMGINDLLSFDFMDAPPMETLITAM
EQLYTLRDPGXXGLLTDKPLISLPLSRRMAGVPPLEPMLCKMLIMSCPPGGGYSEARXAL
AIVLRISARMLFYRPKGEQRRRDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNP
WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDP
QEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAF
FKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggccgaggagctcgccaagctcgagtacctgtcgctggtctccaaagtc
tgcaccgagctggacaaccacctgggcatcaacgacaaggacctcgctgagtttgtgata
aatctgcttgagaaaagcccacaaccctttggcagcatttacagacaagctttggtgaag
aatggtgctgaattcacggattcccttgtcagcaacttgttgcgtctcatacagaccatg
cggcctcctgcaaaaccttccactagcaaaaatgctcctaagccaaaaacagaaaaggag
aagctgaaggatttgtttccagccctctgtaggccagacaatcccacagtcaggacaatg
ctggatgaagatgatgtgaaggtggctgcagatgctttgaaggagctggaagctttgatg
cccggcactggcgacgatacagcatcgtaacatagtgagagcaccagccgaaagcgcaat
gaaattcgccgtcgtagtagagccgggctcaaaatcgcgaccgaaagtctcgctcgagac
cgcggaaacgaacggaataaggagtaaatccagagcaccgctcgagcagaagtctgagca
gggcaacaggatgagtctgaaaccggccggagaaggcggtggtggcgatggcgggataaa
catgtggaccgacctcctcccgaggagccttccattggcgacatctataacggcaaagtc
accagcatcatgcagtttggctgctttgtgcaacttgaagggctcaggaagcgctgggaa
ggacttgtccacatctcagagctgcgccgtgaggggcgtgtagccaacgtggctgatgtg
gtcagcaaaggccagcgggtaaaggtcaaagttctctcattcactggctccaagaccagc
ctcagcatgaaggatgtggatcaagacacaggggaagacctgaaccccaacaggtaaaga
cacctggtagggagaggccaactgaaggaaagcgaccatgaaggacccagcagtagaccg
gcccactccatctgtgtccgtagtcaagcgccctgaaattatgaggcgactgacgcgctg
gagcggaagcgcctcacccgcatttcagacccggagaaatgggaaatcaagcagatgatt
gctgccaatgtgctctccaaagaggagttcccgngttttagcgtagagaaagcggggatc
ctgccaaagttaacccgatgagggaaagcgaacctggaaagtgagctggtggaggaggag
gaacctacgttctcttctaaaaagcataccacctgcctcctctttgcttggaggcttggg
cagaacccaggctccctttctcaagcccatgccatgatgcaagcggcggcactagcaaaa
gaaaaaggaaggaactaaaaaaacgaaggcgcgggagaggcggagatggactccatcccc
atgggactcaacaaacactgggtggaccccctcccagatgtggacgggaggcaaattgct
gccaacatgcgggggattggaatgatgccaaacgacatccccgagtggaagaaacacgct
tttggaggcaacaaaggtacctcttgcgacaaaagaactcagctgtcccatcatggtgga
acagggcaggaaagctctcccagctttcccggctgaaggatccagctcatccaggcagtc
cacgataaccagatactgattgtcatcggagagacgggctctggaaagacgactcagatc
acccagtacctggctgaggctggctacaccacccgcgggaagattggctgcacccagcca
cgccgagtggctgccatgtctgtcgccaagagggtttctgaggagtttggttgttgtctg
gggcaggagatagtggcgatgtggataggctgggggccctcttggggaaatcacttgaaa
ccaggtgggaaggacgcggcgtcaccatccgcaccgagtattatctttggtctcctgaaa
aagactgttcaaaagagaccagacatgaagctgattgtgacttcggccaccctggatgca
gtcaagttctctcagtatttctacgaggctcccatcttcaccatcccaggcaggacatta
cccagtggagatccactcaccgagggcgagggagatatcctggtgtttttgaccgggcaa
gaggagattgacacagcctgtgaaattctctatggccggttgaaattaaagctgggccca
ggcatgccgaggcacgttcatctaatactcaccgggtgctttggcgaatgcagacaggcc
caggcaaagcagcgggctgggagagctgggagaacaggcccaggcaagtgctaccggctc
tacacggagcgtgcctacgctgataggagatgcgccccaacccttaagcacgtgccgaga
tccaaaggaccaggcttggctagcactgtgcacaataaaggtggcgcaatgggaataaac
gacctgctgtctttcgatttcatggatgctcccccaatggaaacgctcatcactgccatg
gagcagctgtacacccttagagaccctggatgatgagggctgctgactgacaagccatta
atatcccttcctttgtcccgacggatggccggagttccccccctggagcccatgttgtgc
aagatgctgatcatgtcctgtccacctggggggggttacagtgaggcaagataggcgctc
gccatagtgctccgtatatctgcaagaatgctcttctatcggcccaaaggtgagcaaagg
cggagagacaagcaagctctcgctgaccaaaagaaagccaaattccaccagaccgaaggg
gaccacctcacacttctcgctgtgtacaattcctggaagaacaacaagttctccaatccc
tggtgctacgagaacttcatccaagcccgctcactgcgccgggcgcaggatatccgcaag
caaatgctgggcatcatggacaggcacaagttggacgtcgtatcgtgcggaaaagcgacc
gtgcgggtccagaaggccatctgcagtggcttcttccggaatgcagccaagaaagatccc
caggagggttaccggaccttgattgaccagcaggtggtctatatccacccctcaagcgcc
ctcttcaaccgccagcctgaatgggttgtgtatcatgagctggtgctcacaaccaaggag
tatatgcgggaagtcaccaccatagacccccgctggctggtggagtttgccccggctttc
ttcaaggtttctgaccccacaaagctgagcaagcagaagaagcagcagcgcctggagcca
ctttacaaccgctacgaggagcccaacgcctggaggatctcgcgggcattcaggcgccgg
tga
DBGET
integrated database retrieval system
