Sphaerodactylus townsendi (Townsend's least gecko): 125444876
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Entry
125444876 CDS
T08213
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow00100
Steroid biosynthesis
stow01100
Metabolic pathways
Module
stow_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125444876
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
stow01006
]
125444876
Enzymes [BR:
stow01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125444876
Prenyltransferases [BR:
stow01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125444876
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
125444876
NCBI-ProteinID:
XP_048373585
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Position
LG01:34398253..34421854
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AA seq
420 aa
AA seq
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MPMELLKEWLGHPVELYNLVKFKMGGYKAVMPKVDQNSLSDGLRTCFKHLNQTSRSFAAV
IQSLDGELRNVVCIFYLVIRALDTVEDDMTISLETKISMLQNFHSFLYQPDWKFTESKDR
YRQVLEDFPMISSEFRNLPKVYQDFTVEVCRKMSLGMVEFLEKKVDSKQDWNRYCHYILG
VVWISLSRLFSVSKLEDPIVGQDMELATSVGLFLQKTNIIRDYLEDQLEGREFWPREVWN
KYVKKLSDLAKPENIEGAVQCMNELITNTLHHVPDVLIYLSRLKNQSVFNFCAIPQVMGI
ATLAACYNNKQVFRGVVKIRKGQAITLMMDATNMDAVKAITYQYMEEIYQKIPSTDPSSG
RTQQIIASIRSLSVPSGSLLSRMHYSPIYLSCAMVLAALSWQYLSTVLKTTEEYVHTGEN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggagctgctgaaggaatggctgggccatccggtggagctctacaaccttgtg
aagttcaaaatgggaggctataaggcagtgatgcccaaagtggaccagaactcactcagt
gacggcctccgcacttgcttcaagcacctcaatcagaccagccggagtttcgccgccgtc
atccaaagccttgatggagagttgcgcaatgtggtgtgcatcttctacttggttatccga
gctctggacacggttgaggacgacatgaccatcagcctagaaaccaaaatctccatgtta
cagaatttccactccttcctgtaccagccagactggaaattcactgagagtaaggacagg
tacaggcaggtactggaggacttcccaatgatctcctcagagtttcggaacttgccaaag
gtctatcaggatttcactgtcgaagtttgccgcaaaatgagccttgggatggttgagttt
ctggaaaagaaagtggattccaagcaggattggaacaggtattgccattatattttgggg
gtggtgtggatcagcttgtcgcggctgttctctgtatccaagctggaagatcccattgtt
ggacaagacatggagctcgccacctccgtgggcctcttcctgcagaaaaccaacatcatt
cgagactacctggaggaccaattggaaggcagagaattttggcccagagaggtttggaat
aagtatgtgaagaagttgtctgatttggccaagccagagaatattgaaggggctgttcag
tgcatgaacgagctcatcactaacacgctccatcatgttccggatgtcttgatctactta
tcccggctgaaaaaccagagtgtgttcaatttctgtgcaattccacaggtgatgggcatt
gccactttggcagcctgctacaacaacaagcaggttttccggggtgtggtgaagatccgc
aagggacaagccatcaccctgatgatggatgccaccaacatggatgctgtgaaagccatc
acgtaccagtacatggaagagatctaccagaagatcccaagcaccgatccttcttccggc
agaactcaacagatcattgcttccatccgatccctgagcgtgcccagtggttccctgctc
tcccggatgcattactcccccatctatttgtcgtgtgccatggtgttagctgccttgagc
tggcagtatctgagcacagtcttgaaaacaacagaggaatacgttcacacgggcgagaac
tga
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