Sphaerodactylus townsendi (Townsend's least gecko): 125445524
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Entry
125445524 CDS
T08213
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125445524 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125445524 (RNF43)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125445524 (RNF43)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125445524 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
Motif
Other DBs
NCBI-GeneID:
125445524
NCBI-ProteinID:
XP_048374565
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All DBs
Position
LG16:complement(17913729..17952381)
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AA seq
681 aa
AA seq
DB search
MSVGPQLQLAVLWPWLLMATLQIRLGYSGLALAAVVEADRSLAQKAIIRVTPFKLEPLML
EGVFASIADVTPAEGNLLQFHPLSLCNTSEDEHTFSGFVSIIKLERPERDLHPCLSLANK
AKLAGERGARAVLFDITDDQGAADQLSDSSFSTCATKIQKRAAGRLEEAQITVTDQDPSA
LPLRPREDVHQPRPGQRPHFFRQHPGRALYHFPQTLPPAAPRNCPEHPFLHSPQLSQSGI
GTMHYLRYGPVGSETWCPHQPPRVQRLLVSQPQESRLCEQAAHRPFLLQRQPPCRGGLRA
PLSDKLNRAGPPNRGIRHGRHHHHNSGSGESYLTEPSGYLPDGPGSDTSSGPCHGSSSDS
MLNCTDVSLQAIHGSCSTFHSSLSSDYDPFAFCGSDKPATESGQEPSPSWREPRPRLQSV
DMAGKGRAQLASNHVHYHHHHHRHHHYGRSPPDYLSGRLSHEPIQRKAKYPRAKAGLLSA
QVHKRTEKVHLRESGSDSQEATLLGQPSCLPQRHAPSLPDRLDFRAEASGQAGAMGSQTS
PQPFLQLHPSRRKWKHPLVSSQFPLPEDSSVPPDCSAPTRCGHSSANCCPTEMQPLVPSG
SSVHTFSDCQQVSKCLAPHSDSRPREQGNRTVEQDCESVLLAEGSGMDTTGNYASVYLSC
QIPQPHQGSKEDVPDIYEHSV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttggcccccagctacagttggcagtcctctggccttggctgcttatggctacg
ctgcagatccgactggggtactctggactggcgctggcagccgtggtagaagccgaccga
tcgctggcccaaaaggcaatcattcgggtgacccctttcaagctggagcctctcatgctg
gaaggagtctttgctagcattgcggacgtgaccccggcagaaggaaatcttctgcagttc
caccccctgtctctatgcaacaccagtgaagacgagcacaccttctcaggatttgtctcc
atcatcaagctggaacgtcccgagcgggatctccacccctgtttgtcgctggccaacaag
gcaaagctggcgggcgagagaggggcgcgggctgtcctcttcgacatcacagacgaccag
ggtgctgctgaccagctttcagacagctccttttccacctgtgccaccaaaattcagaag
agggcagcaggcagactcgaagaggcacagataactgttactgatcaagatccctcggct
ttacccctgcgcccccgggaggatgtacatcagccaaggcctgggcaaaggccccatttc
ttccggcaacatccgggacgtgccttgtatcacttcccacagactctccccccagcagcc
cccaggaactgccccgaacaccctttcctccactctccgcagctttcccagtcaggtatc
gggacaatgcattacttgcgctatggaccggtgggttcagagacatggtgccctcaccag
ccgcctcgggtccaaagactattggtttcccaacctcaggagtctcggctgtgtgagcag
gctgctcacaggcccttcctgcttcaacgccagcccccctgccgaggaggactgagggct
cccctctccgacaagctcaaccgtgccggtcctcccaacagaggaatccgccacgggagg
catcatcaccacaacagcggctcaggggagagttacctcacggagcccagtgggtacctt
cccgacggccctggtagtgacaccagttctggtccttgccacggctcctccagcgactcc
atgttgaattgcactgacgtcagccttcaggccatccatggaagctgttccactttccac
agctccttgagcagcgattacgatccttttgccttctgcggttcggacaagccagccacg
gagagtgggcaagagccgtctccgtcttggagggagccacggcccaggcttcagtcggtg
gacatggcggggaagggcagggctcagctggccagtaaccatgtccattaccaccaccac
catcacaggcaccaccattacggacggagccccccagactatctgagtggcaggctgagc
cacgagcccattcaacgcaaggccaaataccccagggccaaagctgggctacttagtgcc
caggtgcacaaaaggactgagaaggtacacttgcgagaaagcggctcagactcccaggag
gcaactctgctcgggcagccttcttgtttgcctcaaagacacgccccttccttgcccgac
agattggacttcagggcggaagccagtgggcaagcaggagccatggggtcccagacctct
ccccagcccttcttacaacttcatcccagcaggaggaaatggaaacacccccttgtctct
tcccagttccctttgccagaggattccagcgtgcctccagactgcagtgcccccactcgc
tgtggccacagctctgccaactgctgccccacagagatgcagccgcttgtgcccagcggt
tcctctgtgcatactttttccgattgtcagcaagtttcaaagtgcttagctccacattct
gatagcaggcctcgggagcaggggaacaggacagtggaacaggactgcgaatctgtgctt
ctggcggaaggttccgggatggacactacggggaactatgccagtgtttacctcagctgc
caaattccacaaccccatcagggatctaaagaggatgtcccagatatatacgaacattca
gtttaa
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