Sphaerodactylus townsendi (Townsend's least gecko): 125445551
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Entry
125445551 CDS
T08213
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04517
IgSF CAM signaling
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125445551 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125445551 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stow04812
]
125445551 (SPTBN1)
Cytoskeleton proteins [BR:
stow04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125445551 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
125445551 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
LPD22
Motif
Other DBs
NCBI-GeneID:
125445551
NCBI-ProteinID:
XP_048374599
LinkDB
All DBs
Position
LG01:complement(39071393..39299680)
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDEWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAENYHDIKRITARKDNVIRLWEYLLELLRARRLRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGVQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLFSKHKAFEDEMSGRSSHFQQAVKEGEDMIAEDHFGSEKIRERIT
DIQNQWANLEQLSAIRKKHLEEASLLHQFQADADDIDTWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIASYRSTIDSLHEQARGLPQEHAESTDVQSRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMVIPEKLEDLEVIQHRFESLEPEMNS
QASRVAVVNQVARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDVKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQARAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHKKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIENEGMQLIAEKPETEAVVKEKLTSLHQMWVELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQ
SQAKALSQEGKSTDEVDGKRIVVEKKFVELLAPLNERKSHLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDKSLNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQSAYAGDKADDIQRRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSTKTGEEAQQWDGTKGDQVSQNGLPPDQESPRMGEAREANEMVNGATDQRTSSKET
SPVPSPTTDRKAKAGLQAQTAATLPAKTQEIPSAQMEGFLHRKHEWESHSKKASNRSWHN
VYCVINNQEMGFYKDAKAASSGIPYHSEIPVSLKEAICEIAVEYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIDVSASTQSTPATSRAQTMPASVTITSESSPGKR
EKEKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccactgtagcaacagattatgacaatattgaaatccaacagcaatacagtgat
gtgaacaatcgctgggatgttgatgaatgggacaatgaaaacagctctgcacgattgttt
gagaggtctcgcatcaaagccttagcagatgaacgagaagcagtccagaagaagaccttc
actaagtgggttaactctcacttggcacgtgtatcctgtagaattacggacttgtacacc
gatcttcgtgatggacggatgcttattaaactgttggaagttctttcaggagagaggctt
cccaagccaacaaagggaaggatgcgcatccactgcttggagaatgttgacaaagccctc
cagttcttgaaagaacagcgagtgcatcttgagaacatgggatcccacgacattgtggat
gggaatcacagactaacacttggccttatttggactattatattgagattccagatccag
gatatcagtgttgaaacagaagacaacaaagagaagaagtctgcaaaagatgcactgctg
ttgtggtgccagatgaagacagctggctatcctaacgtcaacattcacaacttcaccacc
agctggagggacggcatggctttcaacgcgctaatccataaacacaggcctgatctaatt
gactttgataagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctg
gcagaacagcaccttggccttactaaactattggacccagaggatatcagtgttgaccat
cccgatgaaaaatccatcatcacctatgtggtgacatattaccactacttttctaagatg
aaagctctagctgttgaaggaaagcgtattggaaaggtgcttgacaatgcaattgaaacc
gagaagatgatagagaagtatgaatcactggcttctgacctcctcgagtggattgagcaa
accattatcatcttgaacaaccgcaaatttgccaactcgctggttggtgtgcagcaacag
ctacaggcattcaacacataccgcacagtggagaaaccacccaaattcacagaaaaagga
aacctggaggtgctgctcttcaccattcaaagcaaaatgagggctaacaatcagaaagtg
tacatgcccagggaagggaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgtaatgagctcatccgacaagagaaactg
gaacaactcgcccgcagatttgaccgcaaggcagctatgagggagacttggctgagtgaa
aaccagcgcctggtttctcaggacaactttgggtttgaccttccagctgtggaggctgcc
acaaagaagcatgaagccatcgagacagacattgcagcctatgaagaaagagtgcaggca
gtggttgctgttgccaaggagcttgaggctgagaactatcatgatatcaaacgtatcact
gcaaggaaagataatgtaatccgcttgtgggagtacctcttggagctgctcagggcacgc
aggctacgactggaaatgaaccttggtctgcagaagatattccaagagatgctgtacatc
atggactggatggatgaaatgaaggtgctgctactctctcaagactatggcaagcacctc
ctgggggtagaagacctgttgcagaaacacgcacttgttgaggctgacattggcgttcag
gctgagagagtgcgaggagtcaatgcatcagctcagaaatttgccactgatggagaaggt
tacaagccctgtgacccacaagttatcagagaccgtgtggcccacatggagttctgctac
caggagctttgtcagttagcagccgagcgccgagctcgcctggaagagtcccggcgcctt
tggaagttcttctgggaaatggccgaagaggaaggctggataagggaaaaggaacaaatt
ttgtcgtcggatgattatgggaaagacctcacgagtgtcgtcaggctttttagcaagcac
aaggcctttgaagatgagatgagtggtcggagcagccatttccagcaggcagttaaagaa
ggagaagatatgattgctgaggaccactttggatctgagaagatcagagaaagaatcact
gatatccagaatcagtgggctaacttggagcagctctctgccatcagaaagaagcatctt
gaagaagcgtctctccttcaccagttccaggctgatgcagatgacattgacacgtggatg
ttggacatccttaagatcgtctctagcagtgatgttggccatgatgaatattctacccag
tccttggttaagaaacacaaagatgtcgctgaagagattgcgagctacaggtcgaccatt
gattcattgcatgaacaagccagaggtttgccacaggagcatgcggagtctacagatgtt
caaagcagattgtctggaatagaggaaaggtataaagaggttgctgaacttacacggctt
cgtaagcaggcactgcaagacaccttggctctgtacaagatgttcagtgaagcagatgcg
tgtgagctttggattgatgagaaggagcaatggctgaacaatatggtgatccctgaaaaa
ctggaagatctggaagtgatccagcacaggtttgaaagtttagaaccagagatgaacagt
caggcatcacgtgttgctgtggttaaccaggttgctaggcaactgatgcacagcggtcat
ccaagtgagaaggagatcaaggcacagcaagataagctcaacacgaggtggagccagttc
agagaattggtggacgtaaagaaagatgctcttatctcagccctcagtatccagaactac
caccttgaatgtaatgaaaccaaatcttggatcagggagaagactaaagttattgaatcc
acccaagaacttggcaatgacttggctggcgtcatggcccttcagagaaagctgacagga
atggaacgcgacctggtagctattgaggccaagttaagcgacctccagaaagaggcagag
aagttagaatcagagcatcccgaccaagctcgagccatcctctccaggcttgctgaaatc
agtgacgtctgggaagaaatgaaaacaaccttgaagaaccgagaagagtctcttggagag
gcaagcaagctacagcagttcttgcgtgacctggacgacttccagtcctggctgtcccga
acccagactgccattgcctcggaagacatgccaaacacgctggcggaagccgagaagctg
ctcacgcagcatgagaacattaagaacgaaatcaacaactacgaggaagactatcagaag
atgagggatatgggcgagatggtgacacaagggcagacagatgctcagtacatgttctta
caccagcggctacaggccttggacaccggatggaatgagcttcacaaaatgtgggaaaac
cggcagaatctcctctcccagtcccatgcctatcagctcttcctcagagatacaaagcaa
gcagaggcctttcttaacaaccaggaatatgttttggcgcacactgaaatgcccaccact
ttggaaggagcagaagctgctatcaaaaagcaggaggatttcatgaccacaatggatgcc
aatgaggagaagattaatgctgttgtggagactggaaggcgactggttagtgatggaaac
attaactctgacaggatccaagagaaagtggactccattgatgacaggcataagaagaat
cgtgaggccgccagcgagcttctgatgaggttgaaagacaacagagatcttcagaagttt
cttcaggattgccaagagctgtctttgtggattaatgagaagatgcttactgcacaggac
atgtcttacgacgaagccagaaacctgcacagcaaatggctgaagcaccaagcattcatg
gcggagcttggatccaacaaagaatggcttgacaaaattgaaaatgaagggatgcaactt
atcgctgagaaacctgaaacggaggctgtggtgaaagagaaactgacaagcctgcaccaa
atgtgggtggagcttgaaagcactacccaaaccaaagctcagcggctttttgatgccaac
aaggctgaattgttcacccagagctgtgctgacttggataaatggctgaatggcttggaa
agccagatacagtcagatgactatggcaaagacctcaccagcgtcaatattttgttgaag
aagcaacagatgcttgagaaccaaatggatgttcggaagaaggaggtagaggagcttcag
agtcaggcaaaggcactgagccaggagggcaagagtaccgatgaagttgatggcaaacgc
attgttgtggagaagaagttcgtggagctgctggcacccttgaatgagaggaagtcccac
ttgctggcttccaaggagatccatcagttcaaccgggatgtggaagacgaaattttgtgg
gttggagagaggatgcctattgccacatccacagatcatgggcacaacctccagaccgtt
cagctgttaattaagaagaatcagacacttcagaaagaaattcagggacaccagcctcgc
atcgatgacatttttgagaggagccaaaacatcgtaacagacaagagccttaatgctgaa
gcaatccagcagcggcttgcggacttgcagcagctgtggaacctcctgatagaggagaca
gaaaaacgccacaagcgcctcgaggaatctcacaaagcccagcagtactactttgacgca
gcagaggctgaagcctggatgagcgaacaggagctctatatgatgtcagaagagaaggcc
aaggatgaacaaagtgccgtttctatgctgaagaaacaccagattttggaacaagccgtg
gaagactacgcagagacagtgcatcagctgtccaagaccagcaggactttggtggcagac
aatcacccggaaagtgaacgtatcagcatgcggcagtccaaggtggacaagctctatgca
ggcctgaaagacctgtcagaggagcggaggggcaagctggatgagaggcaccggctattc
cagttgaaccgtgaggtggatgacttggaacagtggattgcggaaagggaagtggtggct
gggtcccatgagctggggcaggattatgaacatgtgacaatgttgcaagagcgcttccgc
gagtttgcccgagacactgggaacattgggcaggagcgtgtggatactgtcaaccacatg
gcagacgagctcatcaattctggccattcggatgctgccactattgccgaatggaaggat
ggtcttaacgaggcttgggctgacctcctggaactcattgacacgagaacacagatccta
gcagcctcttatgaactgcacaaattttatcacgatgccaaggagatctttgggagaata
caggacaaacacaagaagttgccggaggagcttgggagagatcagaacacagttgagacc
ttacagaggatgcataccacctttgaacatgacattcaggccttaggaacacaggtgaga
cagctgcaagaggatgctgcccgccttcagtcagcctatgctggagacaaggctgatgat
atccagcggcgtgaaaatgaagttttggaagcctggaaggccttgcttgatgcctgtgag
gggcgcagggtccggctagtagacacaggggacaagttccgctttttcagcatggtccgt
gatctcatgctatggatggaggatgtcattcgtcagattgaagcccaagagaagccaagg
gatgtttcatctgtggaattgctgatgaacaatcaccaggggatcaaagcagagattgat
gcccgaaacgacagttttacgacctgcattgagctgggcaaatccttgctggcacggaaa
cactacgcatcagaagagatcaaagaaaagctattacaactgacagagaagagaaaagaa
atgatcgacaagtgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttttcaagagacgccagcgttgccgaggcctggttgctagggcaggagccatacctgtcg
agtcgcgagatcgggcagagcgtggatgaggtggaaaagctcatcaagaggcacgaagcc
tttgagaaatcagcagctacttgggatgagagattttcagcacttgaaagacttactacg
ttggaattgttagaagtacgtcgacagcaagaggaggaagagcggaagcggcagcctcct
tctccagagccaagcaccaagactggagaggaggcacagcaatgggatggcacaaaagga
gaccaggtctcccagaatggtttgccaccagaccaggaatctccccggatgggagaagcc
agggaagccaatgaaatggtcaacggagctacagatcagcggacgagttccaaagagacg
agtccagttccttccccaaccacagatcgcaaagccaaggcagggctgcaggctcaaact
gctgccacactcccagccaaaacgcaagagataccttctgctcagatggagggcttcttg
catcgcaaacatgaatgggaatcacacagcaagaaagcatcaaacagatcctggcataat
gtgtactgcgttattaacaaccaagagatgggcttttacaaagatgcaaaagctgcttcc
tcaggcatcccttaccacagtgagattcctgtgagtctgaaagaagccatctgtgaaatt
gcagttgaatacaagaagaaaaagcatgtgttcaagctgaggctaaccgatggcaatgaa
tacctcttccaggccaaagatgatgaggagatgaacacatggatccaggccatcacctct
gcaatctcctcggacaaaattgatgtgtctgcaagcacacagagtaccccagctacgagc
cgtgcccagaccatgccagccagcgttacaataaccagcgaatccagtcccggcaagcgg
gagaaagaaaaagagaaagacaaagagaagcgatttagcctttttgggaaaaagaagtga
DBGET
integrated database retrieval system
