Sphaerodactylus townsendi (Townsend's least gecko): 125445607
Help
Entry
125445607 CDS
T08213
Symbol
PAFAH1B1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow00565
Ether lipid metabolism
stow01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
125445607 (PAFAH1B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125445607 (PAFAH1B1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stow04147
]
125445607 (PAFAH1B1)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125445607 (PAFAH1B1)
Exosome [BR:
stow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125445607 (PAFAH1B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
LisH
Beta-prop_DCAF12
LisH_PAC1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Nucleoporin_N
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
LisH_2
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
125445607
NCBI-ProteinID:
XP_048374715
LinkDB
All DBs
Position
LG16:complement(1160990..1287114)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagaggcaacgagatgaattaaatcgagcaatagcagattatcttcgt
tctaatggctatgaagaagcatactctgtttttaaaaaggaagcagagcttgatgtgaat
gaagagttagataagaagtatgctgggctcttggaaaaaaagtggacatcagttataaga
ttacaaaagaaggttatggagttagaatccaagctaaatgaagctaaggaggaattcaca
tcaggggggccacttggccagaaacgcgaccctaaagaatggatccctcgtcctccagaa
aagtatgccttgagtggacatagaagtccggtcacgagagtaattttccatccagttttc
agtgttatggtttctgcttctgaggatgctacaataaaggtgtgggattatgagacgggt
gattttgaacgaaccctgaagggccacacagactccgtgcaggatatttctttcgaccac
agtggcaagctactggcctcctgctctgcagacatgaccattaagctgtgggatttccag
ggattcgagtgtatcagaacaatgcatggtcacgatcataacgtttcatctgtagccatc
atgcccaatggggaccatatagtgtctgcctcgagggataaaaccatcaaaatgtgggaa
gttcaaacaggttactgtgtgaagactttcacgggacatagagagtgggtccgaatggtg
cgacctaaccaggatggcaccctgattgccagctgttccaatgaccagaccgtgcgtgtt
tgggtggtagcgacaaaggagtgcaaagcggaactcagagaacacgagcatgtggtagaa
tgcatctcttgggctcctgagagctcctattccaccatatcggaggcgacaggatctgag
actaagaagagtggcaagccggggcctttcctgctctctggatctcgagacaagaccatc
aagatgtgggacattagcactggcatgtgccttatgaccctggtgggccacgacaactgg
gttcgtggtgtcctgttccattctggggggaaattcattttgagctgcgctgatgataag
accttgcgtgtctgggactacaagaacaaacggtgcatgaaaactctcaacgcgcacgaa
cactttgtgacctcgttggatttccacaagacagcgccctatgtggtcactggcagcgta
gatcaaacagtgaaagtgtgggagtgccgttga
DBGET
integrated database retrieval system
