Sphaerodactylus townsendi (Townsend's least gecko): 125445684
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Entry
125445684 CDS
T08213
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125445684
03015 mRNA surveillance pathway
125445684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125445684
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125445684
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125445684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125445684
NCBI-ProteinID:
XP_048374871
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Position
LG16:22735793..22755958
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AA seq
479 aa
AA seq
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MATDSWALAVDEQEAAAESLGNLHLKEERPKPESNGAVVKTEDNAEKTEEEEKEDKAAQS
LLNKLIRSNLVDNTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPNNKFPQCLCLSPTYELALQTGK
VIEQMGKFYPELNLAYAVRGNKLERGHKISEQIVIGTPGTVLDWCSKLKFIDPKRIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWKFAEKVVPDPNIIKLKRE
EETLDTIKQYYVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKIHKLDTDDLDEIEKITN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggactcctgggccctggcggtggacgagcaagaagcggccgcggagtcgttg
ggtaacctgcatctaaaggaggagagacccaaaccagaatctaatggtgctgttgttaag
acagaagacaatgcagagaagacagaagaggaagaaaaagaggacaaagcggcccagtcg
ctgttgaacaagctgatccgcagcaacctggtggacaacacgaaccaagtggaggtgctg
cagagggatcccacatcgcccctctactctgtgaagtcttttgaagagctgcggctgaag
ccacaactgctgcagggtgtctacgccatgggtttcaatagaccatccaagatccaggag
aacgcgttgcctatgatgctggcagagcccccgcagaacctgattgcacagtctcagtct
ggcactggcaagacagcggcatttgtcttggccatgctcagccgagtagaacccaacaac
aaattcccacagtgtttgtgcctttccccaacgtacgagctggccctccagaccggaaag
gtgatagaacagatgggcaagttttatccggagctgaatctcgcctatgcagttcggggc
aataaactggagcgtggccacaagatctctgagcagatcgtcatcggcaccccgggcacc
gtcctggactggtgctccaagctgaaattcatcgatcccaagaggatcaaagtcttcgtc
ttggatgaggcagatgtcatgatagctacccaaggacaccaagatcagagcatccgtatt
cagaggatgctgcccaaggactgtcaaatgcttctcttctcggccaccttcgaagactca
gtgtggaaatttgctgagaaggtcgttccggacccaaacatcatcaagctgaagcgcgag
gaagagacactggacaccatcaaacagtactacgtcctgtgcaacagccgcgaggagaaa
ttccaggccctttgcaacatttatggggccatcacgattgcgcaagcgatgatcttctgc
catactcgcaaaacagctggctggctggctggcgagctttccagggaaggccatcaggtg
gctctcttgagcggtgagatgatggtggagcagcgggcggcggtcatcgagcgtttccga
gaaggcaaagagaaagtcctggtgaccacgaacgtctgtgcccgagggatcgatgtggag
caggtctctgtcgtcatcaactttgacctaccagtggacaaagacgggaatccagacaac
gagacttaccttcaccgcattggccgcacggggcgctttggcaagcgagggctggccatc
aacatggtggacagcaagcacagcatgaacatcctcaataggatccaggagcatttcaac
aagaagatccataaactggacaccgatgacttggacgaaatagagaaaataactaattga
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