Sphaerodactylus townsendi (Townsend's least gecko): 125445730
Help
Entry
125445730 CDS
T08213
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04120
Ubiquitin mediated proteolysis
stow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125445730 (UBE4B)
04120 Ubiquitin mediated proteolysis
125445730 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125445730 (UBE4B)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125445730 (UBE4B)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
U-box type E3
125445730 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
125445730
NCBI-ProteinID:
XP_048374973
LinkDB
All DBs
Position
LG16:complement(32583467..32631285)
Genome browser
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGPPVAAPSPGASHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDESDRREKRSLTDKEPPSGSEISEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSEQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSREENPFASLTATSQPIAAAARSPD
RSLVLNTGSNPGTSPIFCNVGSFGSSSLSSGGGSGGASVSDSCSDHFTIETCKETEMLNY
LIECFDRVGIEERKAPKMCSQPMVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLV
PYMLCRNLPFGFIQELVRTTHQDEEVFKQIFVPILQGLALASKECSLDSDNFKYPLMALG
ELCEIKFGKSHPVCSLVVSLPLWLPKSLSPGMGRELQRLSYLGAFFSLSVFAEDDPRVVE
KYFSGPAITLENTRVVSQSLQHYLESARQELFKILHSILLNGETREAALSYMAAVVNANM
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPSYIYHPRCRIVLPMDETRMKA
TMEDVASWMAELSRDQALFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGM
VIQLVLRILDPAYPDIKLPLSPDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DVVTFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMRNKEHWDLLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDP
FNRQTLTENMLEPVPELKEQIQAWMRDKQNTDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgtcgaaggcgccttgctcggcttgctggcggg
ccatcatcccagcccaccacaccgcttacttctcctcagagagagaatccgccaggacca
cctgtagcagcaccatcccctggagcatcccacagccttgggctaaatgttcacagcatg
acccctgctacctctccaattggcgcatcaggcgtggcccaccgaagccagagcagcgaa
ggggtgagttcgctcagcagctctccgtcaaacagccttgaaacccagtcgcagtccctc
tcgcgatcgcagagcatggatatcgacagcgtctcctgtgagaaaagtatgtcccaggtg
gacgtagattcaggaatcgaaaacatggaagtcgacgagagtgatcggagggagaaaaga
agtctgactgataaggagcccccgtcaggatctgaaatatcagaagagcaagccttacag
ttggtctgcaagatcttcagggtctcttggaaggaccgcgacagggacgtcatctttcta
acttcactttctgagcaatttaaacagaaccccaaagaggtgttctcagattttaaagac
ttgattgggcagatcctcatggaagttttgatgatgtcgacccagtcgagggaagagaac
ccctttgccagtttgacagccacgtctcagccgattgcagcagctgcccgctcgcctgat
agaagcctggtcctgaacactggctccaatccggggacgagccccatattctgtaacgtg
ggatcgtttggttccagttccttatcgagtggtggaggctccggaggggccagtgtttct
gactcgtgcagtgaccatttcaccattgagacatgcaaggagacggagatgctgaactac
ctcatcgagtgttttgacagagtggggatagaggagagaaaagcaccaaagatgtgtagc
cagcccatggtgagccagttgctgagcaacatccgatcccagtgcatttcccacgctgct
ttggtgcttcagggatccttaacgcaaccaaggtcattgcagcagcaatctttgctggtc
ccgtacatgctctgtaggaatctgcctttcggcttcatccaggagctagtgagaactacc
catcaggatgaagaggtgttcaagcagatatttgtccccattctacaaggcctggctctg
gcttcaaaagagtgttcccttgatagtgataattttaaatacccccttatggcgttaggt
gaattatgtgaaatcaagtttgggaaatcccatcccgtgtgcagcttggttgtctccctg
cctttatggctgccgaagtctttgagccctgggatgggacgggagctccaaagactctcc
taccttggagctttcttcagtctctctgtctttgccgaagatgatcctagagtagtcgaa
aagtatttctctgggcctgccattaccctggaaaacacccgggtggttagccagtcttta
cagcattatttggaatccgcaaggcaagagctattcaagatcctgcacagcattttgctc
aatggggagacccgggaggcagctctcagctacatggcagccgtggtcaatgccaacatg
aagaaggctcagatgcagacggacgaccgcttggtgtctacagatggcttcatgctcaat
tttctgtgggtgctgcagcaactcagcacgaagatcaagctcgagacggttgacccctcc
tacatttaccacccccggtgccgtatcgtccttccaatggatgagacacgcatgaaagca
accatggaggacgtagccagctggatggcggagctgtccagagatcaggctctcttttca
gagccaaaatttccgacagagtgcttcttcctcaccctccacgcccatcacctctccatc
ctaccaagttgccgtcgttacattcgcagactgagggccatccgggagctcaacaggacg
gtggaggacctgaaaaacaatgagagtcaatggaaggattcccccctggctacacggcat
cgagagatgctgaaacgttgcaaaacacaactcaagaaactggtgcggtgcaaagcctgt
gcggatgccggcctgctggacgagaatttcctgaggaggtgcctgaatttctatggcatg
gtgatccagcttgtgctgcggatcctcgaccctgcctaccctgacataaaactgccttta
agccctgacgtcccgaaagtgtttgcagcgttgcctgagttttatgtggaagatgttgca
gaatttttattttttattgtacaatattctcctcaggtactttatgagccctgcactcag
gacgttgtgacgttccttgttgtgatgctctgtaaccagaactacatccgaaacccctac
ctggtcgcgaagctggtggaggtgatgttcatgacgaacccagctgtccagccgcggacg
cagaagttctttgagatgatcgagaaccatcccctctccaccaagttgttagtcccgtcg
ctaatgaaattttatacagatgttgagcacactggagccaccagtgagttctatgacaag
tttacaatccgctaccacatcagcaccatcttcaaaagcctttggcagaacatagctcac
cacggcaccttcatggaagagttcaactctgggaagcagtttgtccgctacatcaatatg
ttgatcaatgacaccacgttcttgttggacgagagtttagaatcgctaaagcggatccat
gaagtgcaagaggagatgaggaacaaagaacattgggacctgctgcctagggaccagcaa
caggctcggcagtctcagctcgcacaagacgagcgagtgtcgcgctcctacttggccctg
gcaacagaaactgtcgatatgttccatatcctcaccaagcaagttcagaagccttttctc
agacctgaacttggaccacgattggctgccatgctgaacttcaaccttcagcagttgtgt
ggccccaagtgccgtgacctgaaagtcgaaaaccctgagaaatatgggtttgaaccaaag
aagcttttggaccaactgacagacatttacctgcagttagactgtgctcgctttgctaaa
gccattgctgatgaccagaggtcttacagcaaggagctgttcgaagaggtgatttcaaag
atgaggaaggctggaatcaaatcaaccatagcaatagaaaaattcaagctgctggcagaa
aaggtggaagaaattgtggctaagaacgcccgagccgaaatcgactacagtgatgctcct
gatgaattcagagatccactcatggacacgctgatgactgaccctgtcaggttaccatcc
gggaccatcatggacagatcaatcatcctccggcaccttctgaattcctctacagatccc
ttcaatcggcagacactaacggaaaacatgctggaaccagtgccagagctgaaagagcag
atccaagcctggatgagggacaaacagaacactgaccattaa
DBGET
integrated database retrieval system
