Sphaerodactylus townsendi (Townsend's least gecko): 125445738
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Entry
125445738 CDS
T08213
Symbol
CHD5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125445738 (CHD5)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125445738 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125445738
NCBI-ProteinID:
XP_048374998
LinkDB
All DBs
Position
LG16:21008995..21073195
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AA seq
1994 aa
AA seq
DB search
MRGAEDPQIGDEPEPSEDDDVVLEGLEDFYSEEQVNIQKKKKPKKLKENKASKIKRKKEG
CLEDEISENEEELGEKSDSEGSNYSPNKKKKKKLKEKKEKKAKWKKKDEDEEENEDGGLK
EPKSSAQLMEEWGLDDVDYAFSEEDYHMLTNYKAFSQFLRPLVAKQNPKIPMSKMMTVLG
AKWREFSANNPFKGSSAAAAAAAIAAAVETVAVAAAAPLSTSAAQPLMPQPVIRKAKTKE
GKGPGVRKKMKTPKDSKKKGKGKKVASLKFRFGGLASKRKKGSSSEEEEREESDLDSASI
HSSSLPSKSSAGLGKKGKRRKKKKRLEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYH
LVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDEEEEEEESGEEEDDHMEFCRVCKDGGEL
LCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWTEPPAPLASAL
PSADSEFAIPPPMPLEGIPEREFFVKWAGLSYWHCCWVKELQLELYHTVMFRNFQRKNDM
DEPPAFDYGSGDEDGKSEKRKNKDPLYAQMEEKFYRYGIKPEWMMIHRVLNHSFDKKGDV
HYLVKWKDLSYDQCTWESGDMDIPDYEHFEQQYWNHREMMLGEDTSCLLKRLNKKEKNLN
NDKLERPPKTPVVDPTVKFDKQPWYIDTTGGTLHPYQLEGLNWLRFSWAQGMDTILADEM
GLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESR
SVIRENEFSFEDNAIRTGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVD
EAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPDRFNNLEGFLEE
FADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKLILTKN
FEALNSKGGGSQVSLLNIMMDLKKCCNHPYLFPVAAMEAPVLPNGSYDGSSLVKSSGKLM
LLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFN
APGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYR
FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEG
MISQGQRIGLPGASXPFXAPILXNXGTVTPGMKKKHGAPPPGENKDVEDISVIHYDDAAI
SKLLDPCGMLHRRSDTNFQSMNEYLSXFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRVHKAGPNYNVAVPKRDQKWQDELSDNQSEYSIGSED
EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR
WGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQ
HVLTRIGVMSLVRKKVQEFEPVNGKYSTPDMIPEGPDVKKGSEVVSSDPNTPVPASPANG
PVGPPSQPEKGDTHLGIPEEKEQVEEKVKKPRDGQVPAGGEKAENEEREDSAESQAKSGT
ENTEEGEKAEPHLEQPSKAPTDEAAQENEKPAEKPELNASPCKGSGKDPKPDDAKAEEKG
SAEAQQNGEKEDDEDGKKDDKNGIRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPHYVILNEPFKSEIQKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQEPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGSDPVVQQASF
GSSQMYSNNFGPNFRGPGPGGIVNYSQMPLGPYVTATPNGPTPSYPDKKIPESLKEGGAV
ECKGRPHDVICIED
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggccgaggacccccagatcggggacgaacccgaaccttcagaagacgacgat
gtggtgctggaaggtttggaggacttctattccgaggagcaggtgaacatccagaagaag
aagaaacctaagaagcttaaggagaacaaggcttccaaaatcaagcggaagaaggagggc
tgccttgaggacgaaatctccgaaaatgaggaggagttaggagaaaaatcagacagcgaa
ggcagcaattattctcccaacaagaagaagaagaagaaactgaaagagaagaaagagaaa
aaagccaaatggaaaaagaaagacgaagacgaggaagagaatgaagatggaggcttaaag
gagcccaagagctcggctcagctcatggaagagtggggcttggatgatgtggactatgct
ttttccgaagaagactaccacatgctgacaaactacaaggctttcagccagtttcttagg
cctttagttgctaaacagaaccccaaaatccccatgtccaagatgatgaccgtcctgggt
gccaaatggagagagttcagtgccaataacccattcaaaggcagttcggcagcagcagcg
gcagctgccatagctgcagctgtggagacggtggccgtggctgctgctgcgccgctttcc
accagtgcggcacaaccgctgatgccccagcctgtcatcaggaaggccaaaaccaaggaa
ggcaaaggtcctggcgtgaggaagaaaatgaagacccccaaagacagcaagaaaaaggga
aaagggaagaaagtggcgagcctgaaattccgctttggggggctcgccagcaagaggaaa
aaaggctcttcgagtgaagaagaggaacgagaggagtctgacttggacagtgctagcatc
cacagctcgtctctgccctccaaatcctcagctggcttgggcaagaaaggcaagcggcgt
aagaagaaaaaaagactggaagatggcgacggttatgagacggaccaccaggattactgt
gaagtgtgccagcagggcggggaaataattttgtgtgacacgtgtccccgtgcctaccac
cttgtctgtttggacccggagctggagaaggcccccgaaggaaaatggagctgtccacac
tgtgagaaggaaggcatccaatgggaaccgaaagatgaagaagaggaggaagaggagtct
ggcgaggaggaagatgaccacatggaattctgccgcgtctgcaaagatggaggggagctc
ctttgctgcgacacctgcccgtcctcttaccacctgcattgcttgaacccaccgctgccg
gaaatccccaacggagaatggctctgccctcggtgcacatgcccaccgttaaaaggcaaa
gtgcagcggattcttcactgggtctggacggagcccccagccccgctcgcgtctgcctta
ccctcagccgactccgagtttgcgatccctcctccgatgcctctggaagggatcccggag
cgagagttcttcgtgaagtgggccggcctctcttactggcactgctgctgggtcaaagag
ctgcagctggagctctaccacactgtgatgttccgcaacttccaaagaaagaacgacatg
gacgagccgccggctttcgattacggctccggagacgaggacggcaagagtgagaagaga
aagaacaaagatcccctctatgcccagatggaggagaagttttaccgctacggcatcaaa
cccgagtggatgatgattcaccgggttctcaaccacagttttgacaagaagggagacgtc
cactacctggtcaagtggaaagatctctcctacgaccagtgcacctgggagagcggcgac
atggatatccccgactacgaacattttgagcagcagtattggaatcacagagagatgatg
ttgggggaggataccagctgcctcctcaaaaggctgaacaagaaagagaagaatctgaac
aatgataaactggaaaggccaccgaaaacgcctgttgtggatcctacagtgaaatttgac
aagcaaccatggtatattgataccacaggtgggactctgcacccttaccagttggagggt
ctcaactggttgcggttttcctgggcgcaagggatggacacgatccttgcagacgagatg
ggcctcggcaagactgtccagaccattgtattcctctactctctgtacaaagagggccac
tccaaaggtccttacctggtcagcgctcccctctcgacgatcatcaactgggaacgggag
tttgagatgtgggcccccgatttctacgtggtcacgtacacgggggacaaggagagccgg
tctgtgatccgtgaaaatgagttctcttttgaggacaatgccatccggactgggaagaag
gttttccggatgaaaaaagaagctcaaataaaattccacgtcttgctcacatcttatgag
ctcatcacgatcgatcaagccgttctgggatctattgaatgggcatgcctggtggttgac
gaagcgcataggttgaagaacaatcagtccaaattctttagggtgctcaatagctacaaa
attgactacaagctgttgctcactgggacacccctgcagaacaacctcgaggaactcttt
catctgctcaacttcctcactccggacagattcaacaacttggaagggttcctggaagag
tttgctgatatctccaaggaagatcagattaaaaaactgcatgaccttttgggccctcac
atgcttcggaggctgaaggccgacgtgttcaaaaacatgcctgccaagacggagttgatc
gtgagggtggaactcagtcagatgcagaaaaagtactacaagctaatcctgacgaagaac
tttgaagccctgaactccaaagggggtggcagccaggtgtcgcttctcaacatcatgatg
gatctgaagaagtgttgcaatcacccctatcttttccctgtggcagccatggaagcccca
gtattaccaaacgggtcctatgatggcagctctctggtgaagtcttcagggaagctgatg
ctactgcagaagatgctgaaaaaactgcgggatggaggccaccgggtgctcattttctcc
cagatgaccaaaatgctggacttgctggaagatttcttagaatttgaaggttacaaatac
gagcggatcgacggcgggattaccggagggttgaggcaggaagccattgacagattcaat
gctcctggagctcagcagttctgtttcctgctctctacccgagctggtggtttgggcata
aaccttgctacggccgacacggtcataatttacgattctgattggaatccgcacaatgac
attcaggcgttcagcagagcccaccggatcgggcagaacaagaaagtgatgatctaccgc
tttgtgacgagggcctcagttgaggagcggataacccaggtggccaagaggaagatgatg
ttgacgcatctggtggtgcgtccaggcctcggctccaagtctggctccatgacgaaacaa
gagctggacgatatcctgaagttcggaacagaggagcttttcaaagatgatgttgaaggt
atgatatctcagggccagcgaatcggactgcctggcgcatcatgaccttttnaggctcca
atactctaaaattaggggacagtgacgcctggcatgaagaagaagcatggtgccccccca
ccgggcgaaaacaaagatgtggaggacatcagcgtgatccattacgacgacgcggccatc
tcgaagctgttggacccttgtgggatgctacaccggcgatctgatacgaacttccagagc
atgaatgagtatctcagcntctttaaagtggcccagtatgttgtgagagaagaggacggt
gtggaagaagtggagcgtgaaatcatcaagcaagaggaaaacgtggaccctgattattgg
gagaagctgttgaggcaccattatgaacaacagcaggaagatttggctcgtaatcttggg
aagggcaagagagtccataaagcaggtcccaactacaatgtagctgtcccaaagagggac
cagaagtggcaagatgagctctccgacaatcagtcggagtattccatcggctctgaagat
gaggacgaagactttgaggagaggccggaaggtcagagtggccggaggcagtccaggaga
cagctgaaaagcgaccgggacaagccactcccaccattgttggcaagagttggggggaac
attgaggtgctgggattcaacgcccgacagcggaaagccttcctgaatgccattatgcgc
tggggcatgcccccacaagatgccttcaactcccactggctcgtgcgggacctccgtggg
aaaagcgagaaggagttcagggcttatgtgtccctgttcatgagacatttgtgtgaacct
ggggccgacggtgctgagacctttgccgatggcgtcccccgggaggggctatctcgccag
cacgtgctgacgcgcatcggcgtgatgtccctagtaaggaagaaggttcaagagtttgaa
cccgtcaacgggaagtacagcactccagacatgatcccagaaggaccagatgtcaagaaa
ggcagtgaagttgtctcttcggacccaaacactccggtcccagccagcccagctaatggg
ccagtgggacccccatcgcaaccagaaaaaggggacacacatctcgggattcctgaggag
aaggaacaagtggaagagaaggttaaaaagccccgcgacggtcaggtgccagctggcgga
gagaaggctgagaatgaggaaagggaagacagtgctgagagccaagcaaaatccggaacg
gaaaacactgaagagggagagaaagcagaacctcatttggaacagcccagtaaagctccc
acagatgaggccgctcaggagaatgaaaagcctgcagaaaagcccgaattaaatgccagc
ccttgtaaagggagcggtaaagatcccaagccagatgatgccaaagcagaagagaagggg
tcagcggaggctcagcagaacggggagaaggaggatgatgaagatgggaagaaggacgac
aagaacgggatccggttcatgttcaacattgcggatggaggcttcacggagctgcacacg
ctgtggcagaacgaagaaagggctgctgtttcctcggggaagatttatgacatctggcac
cggaggcatgattactggctcctggcaggaatcgtcacccacggctacgctcgctggcaa
gacatccagaatgacccccattacgtcatcctcaacgaacccttcaagtcggagatccag
aagggcaactatctggagatgaagaacaagttcctggctcggcgattcaagctgctggag
caggcgttggtgatcgaggaacagctgcgcagggccgcgtacctcaacatgacccaagag
cccaaccacccggccatggccctcaacgcccgcctggccgaagtggagtgccttgccgag
agccaccagcatctctccaaagaatcccttgccggaaacaaacctgccaacgccgtcctt
cataaagtcctaaaccagctggaagagctgctgagcgacatgaaagccgatgtgacccgc
ttaccttccatgttgtcccggatcccgcctgttgctgctcgcctgcagatgtccgaacgg
agcatcctgagccgcctgacaaaccgcggaagtgaccccgtggtccagcaggcctccttt
ggctcctcccagatgtatagcaacaactttgggccaaacttccgaggtccaggaccgggt
ggaattgtgaactacagccagatgcccctgggaccttacgtgacagcgacacctaacggg
ccaaccccgagctaccccgacaaaaagatacccgagtcactgaaagaaggcggagccgta
gaatgcaaaggacggcctcatgacgtcatctgcatcgaagactaa
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