Sphaerodactylus townsendi (Townsend's least gecko): 125445744
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Entry
125445744 CDS
T08213
Name
(RefSeq) TATA-binding protein-associated factor 2N-like isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125445744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125445744
03019 Messenger RNA biogenesis [BR:
stow03019
]
125445744
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125445744
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125445744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125445744
NCBI-ProteinID:
XP_048375010
LinkDB
All DBs
Position
LG16:16367646..16396086
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AA seq
493 aa
AA seq
DB search
MASDSGSFSHSGGQQESYSGYGNQGNQNFGQAPQGYPGYEQSGESSSYGQGYGSYQGNFG
QTQTGYGQSGQQGYGGYETQNQSSSGQESYGFQGQQKDSSGGGKPSYDQKPSYGQQQGSY
DQPSGYGQQQGSYDQQAGYNQQQRPFDQQSGYGQQGQQQSSYDPQAGYGQNRDSYDQQQQ
GYGQPPGSYGQKSNYGQQQGSYGQNQPSYQKEGYGQNMQDDRREKSRFGDDSRGYGGPRG
GGSRFDSDSRGPMSGMSGGDRGGSKNFGGQRDYGPKSDADSESDNSDNNTIFVQGLSDDV
SADQVAEYFKQIGIIKTNKKTGKLMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDG
KEFNGNVIKVSFATRRPEFMRGGGGGGGRRGSRGGGYGRGGGFQGRGGEPKGGDWVCPNP
ACGNMNFARRNSCNQCNEPRPEDSRPTGGDFRGRGGFGGDRGFRGRGGRGGGGFGGKMGG
RNDFRNDQRNRPY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggattctggaagtttcagccattctggcggtcagcaggagagctattcaggg
tatggcaatcaaggaaatcagaactttggacaagcaccacagggttaccctggctacgag
cagagcggggagagttcctcatatgggcaagggtatggaagctatcaaggcaacttcgga
caaactcagacaggttatgggcaaagtggccagcaaggttatggcggttatgaaactcag
aaccagagctcctccggccaggagtcctacggctttcaggggcagcagaaagattcatca
ggaggcgggaagccttcatacgaccagaagcccagctacgggcaacagcaaggttcatat
gaccagccctcaggttatggtcaacagcaagggtcctatgatcaacaggcgggttacaac
cagcagcaaagaccattcgaccagcagtctggctacggccagcagggtcagcagcaaagc
tcatacgacccacaggcgggctacggccaaaaccgagactcctatgaccagcagcagcag
ggctacggtcagccgccaggctcctacggccaaaagtcaaactatggccagcagcaagga
tcatacggccagaaccagccatcctaccagaaggaaggttacggacaaaacatgcaggat
gatcgccgagaaaagagcaggtttggagatgacagcagaggttatggggggccacgagga
ggtggaagcaggttcgattctgacagcagaggtccgatgtctgggatgagtggtggtgac
cgagggggctccaaaaattttggtggtcaaagggattatggtccgaagtcagatgctgat
tcggaatctgataactctgacaacaacaccatcttcgtacaaggactcagtgatgatgtt
tcagcagaccaagtggccgaatatttcaagcaaatcggcatcattaagactaacaaaaag
acaggcaagctgatgatcaacctctacacagacaaggatactggcaagccaaagggggaa
gcaacagtgtcctttgatgaccccccttctgctaaggcggctattgattggtttgatgga
aaggaattcaatggcaacgttatcaaagtctcttttgcaactaggcggcctgaattcatg
cgaggaggtggaggaggcggtggccgccgaggttcacgaggagggggctacggaagaggc
gggggcttccaagggcgaggcggggaacccaagggcggagattgggtttgcccaaatccg
gcttgtggcaacatgaatttcgcccgccggaattcctgcaatcagtgtaatgagcccagg
ccggaagattctcgtcccacaggaggagacttccggggcagaggtggctttggaggcgat
agggggttccgaggccgcggtggccgaggtggcggcggcttcggtggcaaaatgggagga
aggaacgatttcagaaatgatcaacggaacagaccctactag
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