Sphaerodactylus townsendi (Townsend's least gecko): 125445766
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Entry
125445766 CDS
T08213
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125445766 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125445766 (SCARF1)
Membrane trafficking [BR:
stow04131
]
Endocytosis
Phagocytosis
Scavenger receptors
125445766 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
125445766
NCBI-ProteinID:
XP_048375046
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All DBs
Position
LG16:11596299..11610265
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AA seq
825 aa
AA seq
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MKELLPFLSLFLQIQGPRIGTGASELDPNGKHVCRSDSHTQVLTCCPGWKQEGRECPVAL
CEGAVACQEDEVCVRPGLCRCKPGFFGANCNTRCPDEYWGPDCKESCLCYPYGKCDPASG
ECTCHPGHWGPLCQFACQCGPNGHCNPLTGACRCKQGWWAPDCKRQCQCNLGGSRCDPAT
GRCLCDPGWWGRKCSSTCHCNRSPCAQESGRCECRAGTWGATCQHQCQCLHGTCSPQDGQ
CICDAGYQGHRCTDPCPAGTFGPQCRYRCGHCKQKQPCSPVDGFCLACDAGWNGTHCSQP
CPRGLYGENCAQLCPRCYQGETCHPQTGECRSCEPGLRGARCDLPCPPGLFGKGCLFVCP
SCFNGSCDPVSGTCVCQAGYWGISCNETCSEGLYGSNCSETCQCSGNPCHPSSGECRWGG
KSQELLLAGILAPLVVVVLLVCVCCCFCCQSAPVATRDRVPAPDGAPVFQVKHHMQGALA
NFHSTFPCFSLRDYKLPRVTVSHHDAEIPFTPSFLESPSAAWPVDSSFSDMDTDEDYVPA
CHLPPSKAPDPEPQPGLLPEASALNLEPFAIPRTSSIAKAKRPSVSFAEGTCFGPQSPRG
STEAIHFAQKPKVAQGFSQVALFHQPALGREEDDSPESCYENLEAGSWVEDGHQPSPRST
TGGHRKRTSGSRSVAQRVEALEAALSAQGKEPSITTIYVTVGKGEGPSQAPEKQPGSLQR
EGPKLGRSVEGLQLPPKKNPDSDKGARGQPSQGKPDLESTSTKAEAQGLLGCLPTPPCKE
AEQNQCHSQSHSRPEMETGGDTSKVESQEPKYENVSGLVQRPVAT
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagctgctgcctttcttgagtctcttcttgcagatccagggaccgcggatcggg
actggcgcctctgagctggaccccaatgggaagcatgtctgccggtcggacagccacacc
caagtcctcacctgctgccctggctggaagcaagaaggccgagaatgcccagttgcttta
tgtgaaggggctgtggcttgccaagaagacgaggtgtgtgtgcgacccggtctttgccgc
tgcaaacctggcttctttggggccaactgtaatacacgttgtcctgatgaatactgggga
cccgactgcaaagagagctgcctgtgctatccctacgggaagtgtgacccagccagcgga
gaatgcacctgtcaccctggccactgggggcctctctgccagtttgcctgccagtgtggg
cccaacggccactgcaaccccctcacgggagcctgccgctgcaagcaaggctggtgggcg
ccggactgcaagaggcagtgccaatgcaacttgggcggttctcgctgcgatccagctacc
gggcgctgcctctgcgacccagggtggtggggcaggaagtgctcttcgacctgccactgc
aaccgctcgccctgtgcccaggagtctggccgttgtgagtgcagggcagggacgtggggg
gccacctgccagcaccagtgccaatgcctgcatgggacctgcagcccccaagacggacag
tgcatctgtgatgccggctaccagggccacaggtgtacggacccctgtcctgccggaacc
tttgggccgcagtgcagatacaggtgtggccactgcaaacagaagcagccctgctctccg
gtagatggtttctgcctggcctgtgacgctggctggaacgggacccactgcagtcagccg
tgcccgcgagggctctatggggaaaactgtgcccagctctgcccccgctgctaccaaggg
gaaacgtgtcacccacaaacaggggaatgccggagctgtgaaccaggcctccgaggcgcc
aggtgtgacctgccctgtccccctggcttgttcgggaagggctgcctctttgtctgtccg
agctgcttcaacgggagctgtgatccagtctcagggacctgtgtgtgccaggctggctac
tggggcattagctgcaacgagacctgctcggaagggctttatgggtctaactgctctgag
acgtgccagtgttcagggaacccgtgccacccgtcttctggggagtgtcggtggggaggc
aagagtcaagagctccttctagcgggcattctggccccactggtggtggtcgtgttgctg
gtctgcgtttgctgctgcttctgctgccagtcagctccagtggccacccgggacagggtg
ccagctcctgatggtgccccagtcttccaggtgaagcaccatatgcagggggcgctagcc
aacttccactccaccttcccctgcttctccttgagggactacaagcttccacgggtgaca
gtctcccaccatgatgctgagatccccttcacccccagcttccttgaatccccctccgct
gcgtggcccgtggacagctctttctctgatatggacacggacgaggattacgtcccagcc
tgccacctccctcccagtaaagctccagatcccgagccacagccgggccttctccctgag
gcgtcggccctgaatctggagccctttgccatccctcgcacatccagcattgccaaggcc
aagagaccctccgtgtcctttgccgaaggaacctgcttcggcccccagagtcccaggggc
tccaccgaagccatccactttgcacagaaaccaaaggtggcacagggcttctcccaagtt
gccttgttccaccagcctgccctgggccgtgaagaggacgattcgccagagagctgttac
gagaacttggaggctggctcgtgggtggaggacggtcaccagccctctccacggagcacc
acgggtggccacagaaaacgaacctccggttcccggagcgtggcacagcgagtggaagct
ctggaggcagcgttgtccgctcagggcaaagagccgagcatcaccaccatttatgtgacg
gtgggcaaaggggaagggccaagccaagccccggagaaacagccagggagcctgcagagg
gaggggcccaagcttgggaggagcgttgagggtctccagttgccccccaagaagaatcca
gactcagacaaaggtgctagggggcaaccatcccaaggcaagccagacctggaatccacg
tccaccaaggctgaggcccaaggccttctgggatgtctgccaactcctccttgcaaggaa
gctgaacagaatcagtgtcatagccaaagccatagccggccagagatggagactggagga
gacacctccaaggtggagtcccaggaaccaaagtacgagaacgtctctgggttggtccag
cgtcccgtagctacctaa
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