Sphaerodactylus townsendi (Townsend's least gecko): 125445934
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Entry
125445934 CDS
T08213
Symbol
CLTC
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04142
Lysosome
stow04144
Endocytosis
stow05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125445934 (CLTC)
04142 Lysosome
125445934 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125445934 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125445934 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stow04147
]
125445934 (CLTC)
Membrane trafficking [BR:
stow04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
125445934 (CLTC)
Exosome [BR:
stow04147
]
Exosomal proteins
Proteins found in most exosomes
125445934 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_1
Motif
Other DBs
NCBI-GeneID:
125445934
NCBI-ProteinID:
XP_048375331
LinkDB
All DBs
Position
LG16:complement(6216249..6288331)
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AA seq
1702 aa
AA seq
DB search
MDRHVWLSTFIAIERLHLVPASLAVFLHAHLQNLGINPANIGFSTLTMESDKFICIREKV
GEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHT
MTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK
WLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ
AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH
LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQ
NPDLALRMAVRNNLAGAEELFARKFNALFAQGSYSEAAKVAANAPKGILRTPDTIRRFQS
VPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEEL
GDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMR
ISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTR
LLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHT
HLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFE
SFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFL
KEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVD
CSEDVIKSLILVVRGQFSTDELVAEVEKKSRLKLLLPWLEARIHEGCEEPATHNALAKIY
IDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSL
SRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNE
LIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDISNIAIKAT
RKLFFARPSAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGM
VKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARRKARESYVETELIFALAKT
NRLAELEEFINGPNNAHIQQVGDRCYEEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAA
VDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI
TMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAE
LVFLYDKYEEYDNAIITMMNHATDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLN
DLLMVLSPRLDHTRAVNFFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQAL
RTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQY
ASESKDTELAEELLQWFLQEGKQECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFI
QVMKEYLTKVDAIKEKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQA
PFGYGYTAPPYGQPQPGFGYTM
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggatcggcatgtctggctctctacgttcattgccattgagaggctccacctagttccg
gcatctcttgctgtgttcctacatgctcacctccagaatctgggcattaatccggccaac
attggattcagcactctcacgatggagtccgacaaattcatctgcatacgggagaaggta
ggggaacaggcccaggtggtcatcattgacatgaatgatcccagcaaccccattcgccgg
ccgatttccgctgacagcgcaatcatgaaccctgccagcaaggtcattgcactgaaagat
gctgcgaagacccttcaaatctttaacattgaaatgaagagcaaaatgaaagcacacacc
atgacggacgacgtcaccttttggaagtggatctctctgaacactgttgccctggtcact
gacaatgctgtataccactggagcatggaaggggagtcccagcccgtaaaaatgtttgac
cgccactctagtcttgcgggctgccagatcatcaattatcgtacagatgccaagcagaaa
tggttgcttctgactggcatatctgcacagcaaaaccgtgtagtgggcgccatgcagctt
tattcagtagataggaaagtgtcccagcccatcgagggccacgctgctagctttgcgcag
ttcaagatggaaggcaacgccgaagaatccacccttttctgttttgcagtgagaggccaa
gctggaggcaagttgcatatcatcgaagtcgggacgcctcccacaggaaaccaaccgttc
cccaagaaagcagtggacgtcttcttcccacccgaagcacagaacgactttccagtagca
atgcagatcagtgaaaagcatgatgtggtctttctgatcacaaaatacggctacatccat
ctgtatgaccttgaaacaggcacctgtatctacatgaacagaatcagcggagagaccatt
tttgtcaccgcaccccacgaagcaacagctggaatcattggagtcaatcgaaaaggacag
gtgttgtccgtgtgcgttgaggaagagaacatcattccttacatcaccaacgtgctgcag
aaccctgacctggccctgcgcatggccgtccgtaacaaccttgccggcgccgaagagctc
tttgcccggaagttcaatgctctttttgcccaggggagctactcggaagcagcaaaggtg
gccgcaaatgccccgaagggaattttgcgtaccccagacaccatccgccggttccagagt
gttccagcacagcccggtcagacttctcccctgctccagtattttggaatcctgctagac
caaggtcagctgaacaaatacgaatcactagaactctgcaggccggtgctccagcaagga
cgcaagcagctcttggagaaatggctgaaggaagacaagctggagtgctctgaagaattg
ggagatctggtgaagtctgtggacccaaccctggctctcagcgtctacctgagggctaac
gtccccaacaaggtcatccagtgttttgcagaaacgggacaagttcagaagatcgtgtta
tatgcaaagaaggttggctatactcccgactggatctttctcttgaggaatgttatgcgg
atcagcccagaccaaggacagcagtttgcccaaatgctggttcaggacgaggaacctctt
gctgatattacccaaatagtggatgtgttcatggagtacaacctgatccagcagtgtaca
gccttcctcttggatgccctgaaaaacaaccgcccctccgagggacccttgcagacccgt
ttgctcgaaatgaacctcatgcatgcccctcaggttgccgatgccattttggggaaccag
atgttcactcactatgaccgggcccacatcgcccagctgtgtgaaaaagctggcctcctc
cagagagccttggaacacttcacagacctgtatgacatcaagcgtgcagtggttcacact
caccttctcaaccctgagtggttggtgaactactttggctcgttgtctgttgaggactcc
ctggagtgtctgcgtgcaatgctttccgctaacatccgccagaacttgcagatatgtgtc
caggttgcttccaagtatcatgagcagctttcaacacaatcgctcattgagctctttgaa
tctttcaagagcttcgaaggtctcttctatttcctgggctcgattgtcaacttcagccag
gaccctgatgtgcacttcaaatacatccaagccgcttgcaagacaggccagattaaagag
gtggaaagaatttgcagggagagcaactgttacgacccagaacgtgtaaagaacttcctc
aaggaagcaaaactgaccgaccagctccctctgattattgtctgtgaccgcttcgacttt
gtccatgatctggtgctctacttgtatagaaacaacctacaaaaatacattgaaatctac
gtgcaaaaggtgaacccaagccgtctacctgtggtcattgggggcttgctcgatgtcgac
tgctctgaagatgtcattaagagcctgatcttagttgtgaggggccagttctccacagac
gagcttgtggctgaagtggaaaaaaaatctaggttgaagctgctccttccgtggttggaa
gccagaattcacgagggctgtgaggagccagctacgcacaatgccctggctaagatctac
attgacagcaacaacaaccctgagagatttctgcgtgagaacccctactatgacagccgc
gtggtggggaagtactgtgagaagagagaccctcatctggcgtgcgtggcttatgagcgt
ggccaatgcgacctggagctgattaacgtgtgcaatgagaattccctcttcaagagcctc
tcccgatacttggtgcgccgcaaggaccctgagctgtgggccagcgtattactggaaagc
aatccttaccgaagaccgctgattgaccaggttgtgcagacagcactgtcggagactcag
gaccccgaagaagtgtctgtcacggtcaaggctttcatgacagctgacctacccaacgaa
ctgattgagctgctggagaaaattgtcctggataattccgtcttcagcgaacacaggaac
ctgcagaacctgcttatcctgacagcaatcaaggccgatcgcacccgcgtcatggagtat
atcaaccgcttggacaactatgatgctcctgatataagtaacattgcaatcaaagcaacg
aggaaactttttttcgcgaggcctagcgctatctttaggaagtttgatgtcaacacctct
gctgtgcaggttctgatcgaacacattggaaacctggaccgggcgtacgagtttgccgaa
cgctgcaacgagccagccgtgtggagccagctggccaaagctcagctccagaaggggatg
gtgaaggaagcgattgactcctacatcaaagcagacgacccttcctcgtacatggaagtc
gtccaggctgccaacgctagtggaaactgggaagagctggtgaagtatctgcagatggca
cgccggaaggccagggagtcctacgtggagaccgaactcatttttgctctggctaagacc
aaccgcttagccgaactggaagaattcatcaacgggcccaacaatgcccatattcagcaa
gttggtgatcgctgctatgaggagaagatgtacgatgccgccaagctgctgtacaacaac
gtatccaacttcggccgcttagcatccacgctggtccacctgggcgaataccaagcggcg
gtcgatggcgcccggaaagcaaacagcacccgaacatggaaagaggtttgctttgcgtgt
gtcgatgggaaggagttccgcctggcccaaatgtgtggccttcacattgtggtgcacgcg
gatgaactggaggagctaattaactattaccaggaccgtggctactttgaggagttgata
accatgctggaagctgcgctagggctggagcgggcccacatggggatgttcacagaattg
gccatcctctactcaaaattcaagcctcagaagatgagagagcacttagagctgttttgg
tccagagtcaatattcctaaggttctaagagcagctgaacaagcacacctttgggcagag
ttggtcttcctgtacgacaaatacgaagagtatgacaacgccataattacaatgatgaac
cacgcaacagatgcgtggaaagaaggacagttcaaagatatcatcactaaggtggccaac
gtggaactgtattacaaagcaatccagttttatttggagtttaaaccgctgctgctgaat
gacctgctgatggtgctatctcctcgactggaccacacccgtgccgtcaacttctttagc
aaggtcaaacagcttcctctagtgaaaccctacttgcgttcagttcagaaccacaataac
aaatcagtgaatgaatctctgaacaatctcttcataacagaagaagactaccaggcgctc
aggacatcaatagatgcctacgacaactttgacaacatctcgctcgctcagcgtctggag
aagcacgaactgatcgagttcaggaggattgctgcgtacctcttcaaaggcaacaatcgc
tggaagcaaagcgttgagctgtgcaagaaagacaggctatacaaggatgccatgcagtac
gcgtccgagtccaaagacacagagctggcggaggaactcttgcagtggttcttgcaggag
ggcaagcaggagtgttttggagcctgtctcttcacttgctacgaccttctccggccggac
gtggtcttggagactgcctggaggcacaacatcatggacttcgccatgccctacttcatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataagctg
gacgcctcagagtcgctgaggaaagaggaggaacaagcaacagagacgcagcccatcgtt
tatggtcagccacagctcatgttgacggccggccccagcgtggcggtccccccgcaagca
cctttcggctacggctacactgcgcctccctacgggcagcctcagcccggctttgggtac
accatgtga
DBGET
integrated database retrieval system
