Sphaerodactylus townsendi (Townsend's least gecko): 125446009
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Entry
125446009 CDS
T08213
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stow03037
]
125446009 (NPHP4)
Cilium and associated proteins [BR:
stow03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
125446009 (NPHP4)
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GFIT
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NCBI-GeneID:
125446009
NCBI-ProteinID:
XP_048375432
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Position
LG16:21199315..21289765
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AA seq
1433 aa
AA seq
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MGEWQRIFVQNLTVPPHNQRRRHPLSRDSKAFQCVLKQVEGNIMKQRAPNQGSDVEFQLR
LSLFDVTYRHFFGKTWRSATRPLKVVPGQPPTVVFNETVYFHTSLDHPSIILVVEVVASI
QRQDKTFQDLSCGFGILRLFDSKAEPTNLGLKENGLSLYHGTPRALLHPLFQEPIEKNTY
LTVMDSGRLQCALQPHPLLETICHLLPENTLVSRLQRIPGVLTTQEEDVFHKPRLMKTVT
WYLEKLSIHLYPSLEKFEEELLDLLMSDQNILMLHGNALAVQERRLHIGVHNGFCFVQPP
QVVVVVPETEVTRGHFGSLPRKPRASTKPSLEGQALVLRSRIHLAEMVRHPAFGVVFQLE
YVFSAASGADGKTSSATSLTTPAYMHSIRWAVWNPSLDVSSSEVTLPLQGGPKRNPSHVL
VYKTPSTSMSSEEVKQVEPGTIQFYFSTGSDERLRPATKPLSSTKAEPPLSRNSPTSFPR
SPPSPRMLATTQDFIQGPGLSISQLSVSPEDRACKPPLPPSNRAVRSHSLEALERAHEDS
PQGGISHLEYDLSCSSPIQESSSNDQLQELPFTPIHMPIMALGARSGSSSTSLSRASLAR
LRAFGCPEILDCNKEPAQVVDPADPVNFDPQREEADLLQSNEIIFQFLAFTRTSQDGATS
AMWSKTIYFTFQFYRFPPVTTPRLQLVKAEASGTVPSAASSDILVQINQDGTPNLGSSGL
QLKYMVDPSSLKPGEQRWFIRYLAEHSLQIDAWDGDSLLLVGSAAVKLKHLLRQGRTAIQ
AHHDLEVITMEYKQDVPVMSRELLRPGGMKPIGVHATVRGRLHLSLANVGHLCKQRLKKS
NSLPPSRSRIVTAHDGTSGFHGGSLLSINPHSSGNVCQAQKLAEVDSELAAMLFSRLSEV
STAFQHSHREASIIRRRKVERMLSVRRRESQEGDCRKKASFAMGRHEDRIQHLRDLQIIE
AYRERIKAESIASMLSQAITTHHTLYAMFGTTEFFEFVLKNPYGVQHTVTIETDNPELSV
IVDSREWKHFKELTKTVTPLEEDMFHLHENLMPQVYLRPKETVYIPFKYQASTMEHGAMM
QQGPTELTFRDGRKEAAAPWKSGGMQAKHIKVSFTTTGSSKPIAVLSVNVEFQPHVVDQT
FRFYHPELTFLKKSIRLPPWHTLPGAPAGVPGGEPEMYVRCSDPNIICETKKMGPGEPQD
IFLKVAGGPSPQIKRFFVAIYTDPFLAVPTQIWQFYLHSLQRVDVGCITGQLTRLSLVLR
GTQAIRKVKAYSSQPQELKVDPEGIFILPANGVQDLHIGIRPQRPGSQFIYLNLVDVEYH
QLISSWLVCVSCRQPLISKAFEIALAPGGGKGSNKRITYSNPYPTRRMYFLHTNRPDLLQ
FKEDSFEIGGGETYTIGLRFAPSQSAGEEEILIYINDREDKNEETFCVKVTYQ
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtggcagaggatctttgtgcaaaacctgacggtccctccccacaatcagagg
cgtcgccacccactgtcccgggactccaaggcgttccagtgcgtcctgaagcaggtggag
ggaaacataatgaaacagagagcaccgaaccaggggtcagatgttgaattccagctgcgt
ctctccctttttgatgttacgtaccgccatttttttggaaagacctggaggagcgctacg
aggcctctcaaagttgtgccaggacagccccccacagtggtcttcaatgagactgtctat
ttccacacatctttggatcatcccagcatcattcttgtcgtggaagtggtggcttcgatc
cagaggcaggacaagactttccaggacctgtcatgcggctttggaatcctgcgtttgttt
gacagcaaggctgaaccaaccaacctgggcttgaaggagaacgggctcagtttgtatcac
gggactcccagagccctgctgcacccactgttccaggagccgatagaaaagaacacatat
ctgaccgtgatggacagcggccgccttcagtgtgccttgcagccacacccactcctagaa
actatctgtcacctccttccagaaaacacccttgtgtccaggctgcagagaatccccgga
gtgttgacaacacaggaagaagacgtcttccacaaaccacgcctcatgaagacagtcacg
tggtacttggagaagctatccatccacctgtacccttcgttggagaaatttgaggaggaa
ctgttggatcttctcatgagcgatcagaatatcttgatgctgcacgggaatgcgcttgcc
gtgcaggagcggcggctgcacatcggggtgcacaacggcttttgctttgtgcagcccccg
caagttgtggtggtggtgccggagaccgaggtgacccggggacattttggaagcctgccc
aggaaaccaagggccagtaccaaacccagtttggagggacaagctctggtcctacgaagc
cgcatccatttggcagagatggttcgtcacccagcattcggagttgtcttccagttggag
tacgtcttctctgcagcaagtggagcagacgggaagacgtcatctgctacttctctgacc
acaccggcttacatgcattccattcgctgggcggtttggaacccctcgctggatgtgagc
tcctctgaagtgaccctccccttgcaaggaggtcccaagcgtaatcccagccacgttttg
gtttacaagactccatcaacctccatgagctccgaagaggtgaagcaagttgagcctggg
actatccagttctacttttccaccggctccgacgaacgactcaggcctgctacaaaaccc
ttaagcagcacaaaggcagagccgcctctctccaggaattctcctacgtcattccccagg
tctccaccttctcctcggatgttagcaaccactcaagattttatccaaggccctgggctg
tcaatctcccagctctccgtgtctccagaggaccgtgcctgcaaacctccgcttccaccc
tctaaccgtgctgtgcgctcccattccttggaggctctggaacgagcacacgaggacagc
ccgcagggaggcatcagccacttggagtacgacctcagctgtagctcgccgattcaggaa
tcctcctccaatgaccagctccaggagttgccgttcacacccattcacatgcccattatg
gctctcggggcacgctcgggaagctctagcaccagcctttcgcgggcttctctcgcccgc
ttgcgtgcgtttggatgccctgagatcctggactgcaacaaggagcctgcccaagttgtg
gatcccgcggaccccgtgaactttgacccgcagcgggaagaagccgacctcttgcaaagc
aatgaaatcatctttcagtttcttgcattcacaaggacctctcaggacggcgcaacctcg
gcgatgtggtcgaaaaccatctatttcaccttccagttttaccggttccctccagtcact
accccacgtctgcagctggtcaaggcagaggcctctgggaccgttccttcagctgcctct
tctgatatcttggtgcaaattaaccaagatggaacccccaaccttggttcctcaggcttg
cagttgaaatacatggtggatcctagttctctcaagccgggagaacaacggtggtttatc
cgttacctcgctgagcattccctgcagatagacgcctgggatggggattccttgcttctc
gtgggatcggctgctgtgaagctgaagcatttgctccgccagggccggacggctattcaa
gcccaccatgacctggaggtcatcacaatggaatacaagcaggatgtgccagtgatgagc
agggagcttctcaggcctgggggcatgaagcctatcggagtccacgctaccgtgaggggc
aggctccatctgagcctggctaatgtcggccacctgtgcaagcagcggctgaagaaatcc
aactccttgcctccttcccgctcccgaatcgtgactgcgcacgatggaaccagtggcttt
cacgggggcagcttgctctccatcaaccctcacagctctgggaatgtgtgccaggcacag
aagctggctgaggtggacagcgaactggcggccatgttgttctcccgcttaagcgaagtc
agcacggccttccagcactcccaccgcgaggccagcatcatccggaggaggaaggtggag
aggatgctgtccgtgaggaggcgggagtctcaggaaggagattgcaggaagaaagccagc
ttcgccatgggacgacacgaggaccgaatccagcatttgcgagacctgcaaattatcgag
gcctaccgggagcgcatcaaagcagagagcattgccagcatgctgagccaggctatcacc
acccaccacactctatatgccatgtttggtaccactgagttttttgagtttgtcctgaaa
aacccatacggtgtccagcacacggtcaccatcgagactgacaacccagagctcagcgtc
attgtggattccagagaatggaagcattttaaggagctgactaaaactgtcacgccactg
gaggaggacatgtttcatctacatgagaacctgatgcctcaggtctacctgcgtcccaag
gagacagtgtacatcccctttaaataccaagcctctaccatggagcatggagccatgatg
cagcaaggtcccactgagctgacgttcagggacggcaggaaggaagcagcagccccctgg
aagtctggtggcatgcaggcaaaacacatcaaggtctctttcacgacaaccggcagcagc
aagcccatcgccgtcctaagcgtgaacgtggaattccagccgcatgtggtggatcagacc
ttccgcttctaccacccagagctcacgttcctgaaaaagtccatccgcctgcccccctgg
cacacgcttccaggagccccagctggagtgccaggtggagaaccagagatgtacgtgcgc
tgcagtgatcccaacatcatctgcgagaccaagaaaatggggccaggcgaaccacaggac
atttttctaaaagttgctggtggaccaagtccacagatcaagagattctttgtggcgatc
tacacggatcccttcctggccgtcccaactcagatctggcagttctacctccactctctg
cagcgggtggacgttggctgcataacaggacagctgacccgcctctcgctggttctcagg
gggactcaagccattcggaaggtgaaagcatattcctcgcagccccaggagttgaaggtg
gacccagaaggcatcttcatcctccctgccaatggggtgcaggatctgcacatcggcatc
aggccccagaggcccggcagccagtttatctacctcaacctggtggatgtcgagtaccac
cagctcatctcgtcctggctggtgtgcgtctcctgccgacagcctctcatctccaaggct
tttgaaatcgcgcttgctcccggtgggggcaaaggttcgaacaagaggatcacctattcc
aacccctacccaacccggaggatgtattttctgcacaccaaccgtccagacctcttgcag
ttcaaagaagattctttcgagattggcggaggggagacctacaccatcggcctgcggttt
gcccccagccagagtgctggcgaggaggaaatcctgatttatatcaatgaccgtgaagac
aagaacgaagagaccttctgcgtgaaggtcacctatcagtga
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