Sphaerodactylus townsendi (Townsend's least gecko): 125446116
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Entry
125446116 CDS
T08213
Symbol
TRPM1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125446116 (TRPM1)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125446116 (TRPM1)
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Ortholog
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GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
125446116
NCBI-ProteinID:
XP_048375581
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Position
LG17:9399276..9468867
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AA seq
1671 aa
AA seq
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MEGKGAGPKKGRGRKLSGSLRRMSGSFKRASLKGSASGSQKGQKAWIEKTFTKRECVYII
PNSKDSNRCCCGNLISQHVSIPPGGTVNKSEEETKPVDGQPEKWSVTKHTQAFPTDSYGN
LEFQGGGHANKSMYIRVSYDTKPDALLHLMVKDWQLELPKLLISVHGGLQNFDLQPKLKQ
VFGKGLIKAAMTTGAWIFTGGVSTGVIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKE
DLIGKDVTRVYQTMSNPLSKLSVLNSSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQK
INTRLGQGVPVVGLIVEGGPNVISIVLECLREEPPIPVVICDGSGRASDILSFAHKYSEE
GGIISESLRDQLLVTIQKTFNYNRSQAHQLFIVLMECMKKKELITVFRMGSEGQQDIEMS
ILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVFGHHWPPLGSLSAADGSGPEKEKKS
PVPQVKAPRGKGKGKKKGGKQKEEPEEEMDPRKIELLNWVNSLEQAMLDALVLDRVDFVK
LLIENGVNMQHFLTIPRLEELYNTRLGPPNSLHLLVRDVKKRSSRGFGWVNVEGNLPPDY
HISLIDIGLVLEYLMGGAYRCNYTRKTFRTLYNNLFGPKRPKALKLLGMEDDEPPTKGKK
KKKKKEEEIDIDVFDNSRAEVSRFQXIPFHEVLMGVWAVADETWYEAMALFLWQRGEETM
AKALVACKLYKAMAHESSESELVDDISQDLDNNSKDFGQLAVELLDQSYKHDEQVAMKLL
TYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILLPP
TILFLEFRTSDDYSYQSSRENEGAKDKEEDNADGNVDTGSRKGDEEDGDKKQRNLPIGTK
IYEFYNAPIVKFWFYTISYLGYLMLFNYIILVRMDRWPSVQEWVVISYIVTLALEKVREI
LMSEPGKLSQKIKVWLQEYWNITDLVAISTFLIGAMLRLQNQPYMGYGRVIYCVDIIFWY
IRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILHPDEEPSWRLA
RNIFYMPYWMIYGEVFADQIDPPCGDNLYDEDGKRLPPCIPGAWLTPAIMACYLLVANIL
LVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIIFSHLYIILIRLCC
RCKKKREGDQDERDRGLKLFLNDEELKKLYEFEEQCVEEYFREKEDEEQSSNDERIRVTS
ERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEEVSSRMANALEKLAGIDKAELTHTR
SRASSECDTAYLLRQSSVNSSEGSSVYRYHVGGDELAFDDLPTPLSPALGLRKADSKLQL
VPERQGSLRSASSSSTDHPKNTLDVTHTVSRARSGSCFGQEQYRGEEAVPQSLSPVEIMM
NGQSGSRPALRNTHLALERAKLEAAISYPLDKTIAMRYYPSETFNACQETMMKSRSYIFA
QEGRMVGGVNSWTTGYSSLLDQVGPSTIEQWMAEWKYELQQKLTSEPPPEYPGIVSEAEM
RAERKPLLTDTEDDSDVGDVSALSASHPPSPDPTESTDTDNLLPVESDRTCGFLPVRSKS
LHSHSRKARSGKDKLNRPGHASSVSNLVVACGSAAEEQKLKPENASTETEC
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaagggggcaggacccaaaaaaggaagagggaggaagctcagcggctccctt
aggaggatgagcggctctttcaaacgcgcgtcgctgaagggttcggcgtctgggtcgcag
aagggtcagaaagcttggatagagaaaacctttaccaaaagggagtgtgtctacatcatt
cccaacagcaaagactccaacaggtgttgctgtggcaatctcattagtcaacacgtctcc
attcctccgggcggaactgtgaataagagtgaggaggagacgaagccggtggacggacag
ccggagaaatggtccgtcaccaaacacacgcaggcgttcccgacggattcctatgggaac
ctggaattccaaggcggagggcatgcaaacaagtccatgtatatccgagtgtcttacgac
accaagccagatgcactgctccatctaatggtaaaggactggcagttggaacttcccaag
ctcctgatctcagtccacggagggctgcagaacttcgaccttcaacccaagctgaagcag
gtgtttgggaagggcctcatcaaggccgccatgaccacgggcgcctggatcttcaccgga
ggcgttagcacaggggtgattcgccatgtaggggacgctttgaaagaccactcctccaag
tccagagggcggatctgcgccatagggatcgccccctggggcattgtggaaaacaaggag
gacctcatagggaaagacgtgacaagagtttatcaaaccatgtcaaatccactaagcaaa
ctctctgtgctcaacagttcgcatacgcacttcatcctcgccgacaacggcaccctcgga
aagtacggggcggaagtgaaattgcgtcgccaactggagaagcacatctcgctccagaaa
attaacacccggctcgggcagggcgtgccagtggtcgggctgatagtcgaagggggcccc
aatgtcatctcaattgttttggaatgcctccgcgaagagccccctattcctgtggtgatc
tgcgacggcagtgggcgagcgtcggacattttgtcgtttgcgcacaagtattcggaagaa
ggcggcatcatcagtgagtctctgcgggatcagctcctggtgaccattcagaaaaccttc
aactacaaccggagtcaagcccaccagctgttcattgttctcatggaatgcatgaagaaa
aaggagctgattaccgtgttccgcatggggtccgaggggcagcaggatattgagatgtct
atcttgacagctttgcttaaaggcaccaatgcatccgcgccggatcagctgagcttggca
ctagcctggaaccgtgtggacatcgcgcgcagccagatctttgtcttcggtcaccactgg
ccgcctctgggaagtctctctgctgcagacgggtccggcccggagaaggagaagaaatca
cccgtcccacaagtgaaagctccccgcgggaaaggaaaggggaaaaagaaaggagggaag
caaaaagaagagccggaggaagagatggatcccaggaaaatcgaactgctcaattgggtg
aattccctggagcaggccatgttggacgcactggtcctggatcgtgtggacttcgtgaag
ctgctgatcgaaaacggagtgaacatgcagcacttcctgaccatccctcggctggaggag
ctctacaacaccaggctgggtccaccgaactcgctgcatctgctcgtcagggacgtgaag
aagcggtcatctaggggatttggatgggttaacgtcgagggaaacctgccccccgattat
cacatcagcctcatcgacattggcctcgtgctggagtacctaatgggcggagcctatcgc
tgcaactacacacggaagactttccgaaccctttacaacaacttgttcgggccgaagagg
cccaaagctcttaaacttctcgggatggaggacgatgagcctccgaccaagggcaagaag
aagaagaagaagaaagaagaggaaatcgacattgacgtatttgacaattcccgagctgag
gtcagccggttccagtaaattcccttccacgaagtattgatgggtgtgtgggccgtggct
gatgaaacttggtacgaagcgatggccctcttcctttggcagcggggagaggaaacgatg
gctaaggcgctggtggcctgcaagctctacaaggccatggcccacgagtcttcggagagc
gagctggtcgacgacatctcccaggacctagacaacaactccaaggattttggccagctg
gcagtggagctgttggaccagtcttataagcacgacgaacaggtggccatgaaactcctc
acctacgagctgaaaaactggagcaactccacctgcctgaagctcgccgtggccgccaag
cacagggacttcatcgcgcacacctgcagccagatgctcctgaccgacatgtggatgggg
aggctgcgcatgcgcaaaaacccaggccttaaggttatcatgggcatcctcctgccaccc
accatcttgttcttagagttccgaacctccgatgactattcctaccagtcgtcccgggaa
aacgaaggcgccaaggacaaagaggaggataatgcggatggaaatgttgataccggttcc
cgaaaaggcgatgaagaagacggagataaaaagcagaggaaccttcctattgggacaaag
atctacgaattctataatgcccctattgtcaagttctggttttacacgatctcctacctg
ggttacttgatgctgttcaattatatcatcttggtacggatggaccgctggccgtcggtc
caggaatgggtggtcatctcttacatcgtgacgctggccttggagaaagtaagagagatt
ttgatgtcagaaccaggtaaactaagccagaagataaaagtgtggctgcaggaatactgg
aacatcaccgacttggtcgctatctccacgttcctgatcggggcaatgcttcgtttgcaa
aaccagccgtacatgggctacgggagagtcatctactgcgtggatataattttctggtac
atccgagtattggacatcttcggcgtgaacaagtacttggggccgtacgtcatgatgatt
gggaagatgatgattgacatgctgtactttgtggtgatcatgttggtggtgctgatgagc
ttcggggtggcccgccaggcgatcctgcacccggacgaggagccttcgtggcggctggcc
cgcaacatcttctacatgccctactggatgatctacggggaggtgttcgcagaccagata
gaccctccttgtggggacaacctgtacgatgaagacggcaagcgcctcccgccctgcatc
cctggcgcctggctgactccggccattatggcctgctaccttctggtggccaacattctg
ctggtcaacctgctgattgccgtcttcaacaataccttctttgaggtcaagtccatctcc
aaccaagtctggaagttccagcggtaccagctgatcatgaccttccacgaccggccggtg
ctgcctccgccgatgatcattttcagccacctctacatcattttgattcgcctctgctgc
cgctgcaagaaaaagcgagaaggggaccaagacgaacgtgaccgaggactgaagctcttc
ctaaacgacgaagagttgaaaaagctgtacgaatttgaggagcagtgcgtggaggagtac
ttcagagagaaagaggacgaagaacagtcgtccaacgatgaacggatcagagtcacatcc
gaaagagtcgaaaacatgtccatgaggttagaggaagtgaacgaaagggagcacttcatg
aaagcgtccctccagacggtcgacctccggctctcccagctggaagaggtctccagccgg
atggcgaacgcgctggagaaactggcggggatcgacaaggcggagctgactcacacgcgc
tcgcgggcttcctccgaatgcgacaccgcctacctcctccggcagagcagcgtgaacagt
tcggagggttccagtgtgtaccggtaccacgtcgggggcgacgagctggcgttcgatgac
ctccccactcccttgtcccctgctttggggctgcgcaaagcggattcgaaactgcagctg
gttccggaacgccaagggagcctccgttccgcctctagcagctcgactgatcaccccaaa
aacaccttggacgtcacccatactgtctctcgggcccgttccggctcgtgctttgggcag
gagcagtacaggggcgaagaggctgtcccccaaagcctcagtccggtggagatcatgatg
aacggacaatctggatccaggcccgctcttcggaacacccacttagccctcgaacgggcc
aaattagaagccgccatctcctaccccttggacaaaaccatagcgatgaggtactatccc
tcggaaacgttcaacgcttgtcaggagaccatgatgaagtcgaggagttatatatttgcg
caggaggggcggatggtggggggcgtgaacagctggacgacgggatacagtagcctcctg
gaccaagtgggcccatccaccattgaacaatggatggccgagtggaagtacgagttgcag
cagaagctgaccagcgagcccccgccagaatatccgggcatcgtgtccgaggcggagatg
cgggccgaacggaagccgctgctgaccgacacggaagacgacagcgacgtgggcgacgtc
tccgccctcagtgcctcccaccctccttcccccgaccccaccgaaagcaccgacacggac
aacctgctgccggtagagtccgacaggacttgcgggtttcttcccgtccgatccaagagt
ttacacagccattctcggaaggccaggtcagggaaggacaagctcaaccggccaggacac
gccagcagcgtcagcaacctcgtggtggcctgtgggagcgcggcggaggagcagaaactc
aagccggaaaatgcctccaccgagacggaatgctga
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