Sphaerodactylus townsendi (Townsend's least gecko): 125446192
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Entry
125446192 CDS
T08213
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03015
mRNA surveillance pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125446192 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
125446192 (EIF4A3)
03015 mRNA surveillance pathway
125446192 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125446192 (EIF4A3)
03041 Spliceosome [BR:
stow03041
]
125446192 (EIF4A3)
03009 Ribosome biogenesis [BR:
stow03009
]
125446192 (EIF4A3)
03012 Translation factors [BR:
stow03012
]
125446192 (EIF4A3)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125446192 (EIF4A3)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125446192 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
125446192 (EIF4A3)
Spliceosome [BR:
stow03041
]
Complex C
Other components
EJC/TREX
125446192 (EIF4A3)
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
90S particles
Helicases
125446192 (EIF4A3)
Translation factors [BR:
stow03012
]
Eukaryotic type
Initiation factors
eIF-4
125446192 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125446192
NCBI-ProteinID:
XP_048375707
LinkDB
All DBs
Position
LG01:44288152..44300470
Genome browser
AA seq
410 aa
AA seq
DB search
MSGATGGATGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggctacgggcggcgcgacgggttcggcccgaaaacggctcctaaaggaggag
gacatgacaaaggtggagttcgagacgagcgaagaggtggacgtcacccctaccttcgac
acgatgggcctgcgtgaggacctgctgcgcggcatttacgcgtacggttttgagaagcct
tcagctatccaacaaagagcaatcaaacaaatcataaaagggagagatgtgattgcacaa
tcacagtctggaacaggcaaaacagcaacattttccatctctgttctacagtgtctggac
atccaggttcgtgaaacccaagcgttgattctggcacctactagggaattggcagtacaa
attcagaagggacttcttgctcttggtgactacatgaacgtccagtgtcatgcctgtatt
ggaggaaccaatgttggtgaggacatccgaaagctggattatggacagcatgttgtggct
ggcacaccagggcgtgtatttgatatgattcgtcgtagaagtctaaggactcgtgctatc
aaaatgttagtgttggatgaagctgatgagatgctgaataaagggtttaaagaacagatc
tatgatgtgtacagataccttcctccagcaactcaggtggttctgatcagtgccactttg
ccacatgagatcttggagatgacaaacaaattcatgactgaccccatccgcatcttggtg
aaacgtgatgagttgactcttgaagggatcaaacagttttttgtggctgtagagagagaa
gaatggaaatttgatactttgtgcgacctgtatgacactctcaccatcacgcaggctgtc
atcttctgtaataccaaaaggaaggtggactggctaactgaaaagatgagagaagctaac
ttcactgtttcatcaatgcatggtgacatgcctcagaaggagagggaatccattatgaaa
gaattcagatcaggggctagccgagtccttatttctacagatgtttgggccagaggcttg
gatgtacctcaggtgtctctaattattaactatgatctaccaaacaacagagaattgtat
atacacaggattggtagatcgggtcgctatggtcggaaaggtgtcgccatcaactttgta
aagaacgatgacattcgtattctgcgagacattgaacagtactattcgacccagattgat
gaaatgcccatgaatgttgctgatcttatttga
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