Streptococcus toyakuensis: STYK_02640
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Entry
STYK_02640 CDS
T08698
Symbol
cbf1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
stoy
Streptococcus toyakuensis
Brite
KEGG Orthology (KO) [BR:
stoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoy03019
]
STYK_02640 (cbf1)
Messenger RNA biogenesis [BR:
stoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STYK_02640 (cbf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BDB08450
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All DBs
Position
288805..289746
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AA seq
313 aa
AA seq
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MKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQDDSGEIEGKLWDAQPHNVEAYT
AGKVVHMKGRREVYNNTPQVNQITLRLPQPGEPNDPADFKVKSPVDVKEIRDYMSQMIFK
IENSVWQRIVRKLYTKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLADAISEVYPQLN
KSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIALIDSEITKTVMELGIDDTKEEV
VLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDASMMMMSTALALVDKGEMTNKIF
AMDNRSFYKPDLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattagtcacatgaaaaaagatgagctgtttgaaggcttttacctaatcaagtca
gctgacctgaggcaaactcgagctgggaaaaactacctagcctttaccttccaagatgat
agtggcgagattgaaggaaaactctgggatgctcaacctcataacgttgaggcctatact
gctggtaaggttgtccacatgaaaggacgccgagaagtttataacaacacccctcaagtc
aatcaaattacccttcgcctgcctcaacctggcgaacccaatgatccagctgatttcaag
gtcaagtcaccagttgatgtcaaggaaatccgtgactacatgtcgcaaatgatttttaaa
attgaaaattctgtctggcaacgaattgttcgaaagctctacaccaagtatgataaggaa
ttttactcctatccagctgccaagaccaaccatcatgcctttgaaacaggtttggcctat
catactgcgaccatggtgcgcttggcagatgctattagcgaagtctatcctcaactcaat
aagagtctgctctatgctgggattatgttgcatgacttggctaaagtcattgagttgacg
gggcctgaccagaccgagtacacggttagaggcaatcttcttgggcatattgctttgata
gatagtgaaattactaagacagtgatggaactcggtatcgatgataccaaggaagaagtc
gttctgcttcgtcacgttatcctcagtcaccacggcttacttgagtatggaagcccagtc
cgtccacgcattatggaagcagagattatccatatgattgacaatctggatgcaagcatg
atgatgatgtcaacagctttggctttggtggataagggagagatgaccaataaaattttc
gctatggacaatcgttccttctataaaccagatttagattaa
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