Streptococcus toyakuensis: STYK_15420
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Entry
STYK_15420 CDS
T08698
Symbol
pnp_2
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stoy
Streptococcus toyakuensis
Pathway
stoy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stoy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STYK_15420 (pnp_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoy03019
]
STYK_15420 (pnp_2)
03016 Transfer RNA biogenesis [BR:
stoy03016
]
STYK_15420 (pnp_2)
Enzymes [BR:
stoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STYK_15420 (pnp_2)
Messenger RNA biogenesis [BR:
stoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STYK_15420 (pnp_2)
Transfer RNA biogenesis [BR:
stoy03016
]
Prokaryotic type
tRNA degradation factors
STYK_15420 (pnp_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
S1_2
Hemerythrin
KH-I_KHDC4-BBP
SPATA25
Motif
Other DBs
NCBI-ProteinID:
BDB09728
LinkDB
All DBs
Position
complement(1587172..1589385)
Genome browser
AA seq
737 aa
AA seq
DB search
MTKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAEL
QTEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNNVEDLVAIGDEVDVKVIKIDEKGRVDASMKALLPRPPKPERDEKGEKSERPHRPRHH
KDHKPKKEFTETPKDSE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtgtttcaaacgacttttgcgggtcgtgagttaattgtagagactggt
caggttgctaagcaagcaaatggctctgttgtcgtgcgttacggtgagtcaactgtcttg
actgctgccgttatgtctaagaaaatggcaactggggatttcttcccccttcaagtcaac
tatgaagaaaaaatgtatgcggctgggaagtttcctggtggctttatgaaacgtgaagga
cgtccttcaacagatgcgacattgacagcgcgtttgattgaccgtccaatccgaccaatg
tttgcggaaggtttccgtaatgaagtacaagtcatcaacaccgtgctttcttatgatgaa
aatgcatctgcaccaatggctgctatgtttggttcatccttggcactctctatttcagat
atcccatttgacggcccaattgctggggtacaggtgggctatgtagatggccaaatcatc
atcaaccctagtcaagaacaagcagaacaatctctccttgaattgacagtagctggtacc
aagcacgccatcaacatggtagagtctggtgctaaagaattgtcagaagaaatcatgctg
gaagcccttcttaaagggcatgaagctgttaaagaattgattgccttccaagaagaaatc
gttgccgcagttggtaaggaaaaagcagaagtagagttgcttcatgtagacgctgaatta
cagactgaaatcatcgcagcctacaatagtgaccttcaaaaggcagttcaagtagaagaa
aaattggctcgtgaagctgcaactcaagcagtcaaagaccaagtcactgctgtttatgaa
gaaaaatatgcagatcacgaagaatttgaccgcatcatgcgtgatgtggctgaaatcttg
gaacaaatggaacacgctgaagtgcgccgtttgattacagaagacaaggtgcgtcctgac
ggtcgtaaggtcgatgaaatccgtcctttggatgcggttgttgacttccttcctcgtgtg
cacggctctggtctctttactcgtgggcaaactcaggctctttcagtcttgaccttggct
ccgatgggtgaaactcaaatcattgatggtttggatccagagtacaagaaacgctttatg
caccactataacttcccacaatactctgttggggaaactggtcgttacggtgcaccaggt
cgtcgtgaaatcggtcacggtgctcttggtgagcgtgctcttgctcaagtcttgccaagt
ttggaagaattcccatatgctatccgtttggtagcagaagtcttggaatcaaacggttct
tcttctcaggcttctatctgtgctggaactcttgcccttatggctggtggtgtgccaatc
aaggcgccagtagctggtattgccatgggacttatctcagatggaaacaactacactgtc
ttgacagatatccaaggtttggaagaccactttggagacatggacttcaaggttgcgggt
actcgtgacgggattacagcccttcaaatggatatcaagattcaagggattactgcagaa
atcttgactgaggctcttgctcaagccaagaaagcccgttttgaaatccttgatgtgatt
gaagcaaccattccagaagttcgtccagaattggctccaactgctccgaaaattgatacc
atcaagattgatgtggacaagattaagattgtcatcggtaagggtggagaaaccatcgac
aagattatcgctgaaacaggcgttaagattgatatcgatgaagaaggaaatgtatctatc
tactctagcgaccaagatgccatcaatcgtgctaaagaaattattgctggtttggtccgt
gaagccaaagtggatgaagtttaccgtgctaaagtcgttcgtatcgagaaatttggtgcc
tttgttaacctctttgataagacagatgcccttgttcatatctctgagatggcttggacg
cgtaccaataatgtcgaagacttggtagcaatcggggatgaagttgatgttaaggttatc
aagattgatgaaaaaggacgtgtggatgcttctatgaaagcccttcttcctcgtcctcca
aaacctgaacgtgatgaaaaaggcgaaaagtctgagagacctcaccgcccacgtcatcac
aaggaccacaaacctaagaaagaatttacagaaacaccaaaagattcagaataa
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