Streptococcus toyakuensis: STYK_17920
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Entry
STYK_17920 CDS
T08698
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stoy
Streptococcus toyakuensis
Pathway
stoy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stoy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STYK_17920 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stoy03021
]
STYK_17920 (rpoA)
03400 DNA repair and recombination proteins [BR:
stoy03400
]
STYK_17920 (rpoA)
Enzymes [BR:
stoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STYK_17920 (rpoA)
Transcription machinery [BR:
stoy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STYK_17920 (rpoA)
DNA repair and recombination proteins [BR:
stoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STYK_17920 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BDB09978
LinkDB
All DBs
Position
complement(1885314..1886249)
Genome browser
AA seq
311 aa
AA seq
DB search
MIEFEKPNITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLASLPGVAVTSINIEGVL
HEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKIIELDVEGPAEITAGDILTDSDIEIVN
PDHYLFTIGEGSSLKATMTVNSGRGYVPADENKKDNAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLDLFTNLTEIAKSTEVMKEADT
ESDDRILDRTIEELDLSVRSYNCLKRAGINTVHDLTEKSEAEMMKVRNLGRKSLEEVKLK
LIDLGLGLKDK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaatataacaaaaattgatgaaaataaagattatggcaag
tttgtaatcgaaccacttgaacgtggctacggtacaactcttggtaactctcttcgtcgt
gtactactagcttctctaccaggagtagcagtgacatctatcaacattgaaggtgtcttg
catgagttcgacacagttccaggtgttcgtgaagacgtgatgcaaatcattctgaacatt
aaagggattgcagtgaaatcatacgttgaagacgaaaaaatcattgaacttgacgttgaa
ggtcctgctgaaattacagctggagacattttgacagatagcgatattgaaattgtaaat
ccagatcattatctctttacaatcggtgaaggttcttctctaaaagcgacaatgactgtt
aacagtggtcgtggatatgtacctgctgatgaaaacaaaaaagataatgcaccagttgga
acacttgctgtagattctatttatacaccagttacaaaagtcaactatcaagtagagcct
gctcgtgtaggtagcaatgatggatttgacaaattaacccttgaaatcttgacaaatgga
acaattattccagaagatgctttagggctttcagcacgtattttgacagaacatcttgat
ttgtttacaaatcttactgagattgctaagtcaactgaagtgatgaaagaagctgatact
gaatctgacgaccgtattttggatcgtacgattgaggaactggacttgtctgtgcgttca
tacaactgtttgaaacgtgccggtatcaatactgtgcatgatttgacagaaaaatctgaa
gcagagatgatgaaagtacgaaatcttggacgcaagagtttggaagaagtgaaactcaaa
ctcattgatttgggtcttggattaaaagataaataa
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