Scyliorhinus torazame (cloudy catshark): 140384447
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Entry
140384447 CDS
T11303
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stoz03021
]
140384447 (ctr9)
Transcription machinery [BR:
stoz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
140384447 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_14
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ANAPC3
TPR_Slam
TPR_9
ARM_TT21_4th
PknG_TPR
NatA_aux_su
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
140384447
NCBI-ProteinID:
XP_072322263
LinkDB
All DBs
Position
10:188966867..189064522
Genome browser
AA seq
1167 aa
AA seq
DB search
MLSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWMALALEYFKQGKTED
FVKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM
ADKIIMYDQNHLLGRACFCLLEGDKMDQAEAQFNFVLNQSPNNIPALLGKACISFNKKDY
RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALDLNPKCVGALVGLA
VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT
EVEAMQAESCYQLARSFHVQGDYDQAFQYYYQATQFASITFVLPFFGLGQMYIYRGDKEN
AAQCFEKVLKAYPNNYETMKILGSLYATSDEQEKREVAKGHLKKVTEQYPDDVEAWIELA
QILEQSDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLE
RAKAEAEHDEHYYNAISVTTSYNLARLYEALCEYHEAEILYKNVLREHPNYVDCYLRLGC
MARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQN
DTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAH
KGYVREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQSTEV
LLFLARAYFKCGKLLDCKQTLLKARHAAPNDTVLMFNMALVLQRLATSVLRDEKSNLKAV
LNAVKELELAHRYFKYLSNAGDKMRFDLAQAAAEARQCSDLMSQAQYHVARARKQDEEDR
ELRCKQEQHKEMLRMQLVKEQEDKKQKELNEQRKLLEQRSQFLEKTRNLLVFNEEMETSK
EKKKGGGKRGKKGEFEEFVNDDSDDDLPLPKKKRKQRGSGSEPEDGDEDANQKKRKKRRR
PQRGAEDGSDDEETGSRAKKPRKPKVGERKIKGKIKPERLPASMKSKIKSKAIISSSDDD
SSDEGALKIEEGNARDTGSDEDESADKPRKRIVSESESEDGRNQDKSESEAGSSPRSGAA
RSVAGSDSEQSANGRPQSDRSGRSRSASSSSEDESRPVSRATNNSEQRSSDGGGSGQGSA
GESDQESSHGGARQGSVSPTQSDDDSD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcggatccatcgagatcccgctccgggacacggatgaggttattgaactt
gactttgatcagctgccggagggagatgaagtcatcagtatcctcaaacaagaacacacc
cagcttcacatatggatggccttggcgctcgaatacttcaagcaaggaaagacagaagat
tttgtcaagctgctggaagctgctcgtatcgatggaaacctggattatcgagatcatgag
aaagaccagatgacatgtctggacactcttgctgcttactatgtacagcaggctcggaaa
gaaaagaacaaagatgcgaagaaagagctcatcacgcaggccaccttgctgtataccatg
gccgacaaaatcattatgtacgaccagaaccacttgctgggaagagcctgcttctgtctg
ctggagggggacaaaatggaccaagctgaggcacagttcaactttgtgctgaatcagtca
ccgaataacatccctgcactcttgggcaaagcttgtatctcttttaacaagaaagattac
agaggtgctttggcctattataagaaagcccttcggaccaatcctggatgcccagctgag
gtacgactgggaatgggccattgctttgtgaagctgagtaagctggagaaagctcgcctt
gcatttggaagggctttggacctcaaccctaaatgtgttggggcgttggtggggctggct
gtcctggaactgaacaacaaagaggctgattccataaaaaatggcgtgcaactactctca
agagcttatacgattgatcccagcaacccaatggtgttaaatcacctagccaatcacttc
ttcttcaaaaaggattacagcaaagtacagcacctagctcttcatgcctttcataacact
gaggtggaggcaatgcaggcggaaagctgctatcagttggccagatccttccatgtccag
ggtgattatgaccaggctttccagtactactatcaagccacgcagtttgcttctatcacg
ttcgtcctgcctttctttggccttgggcagatgtacatttatcgaggggacaaggagaat
gcagcccagtgctttgagaaggttctcaaggcctatcccaacaattatgaaactatgaaa
attctaggttccctttatgccacctcagatgagcaggaaaagagagaagttgcaaaggga
catctaaagaaagtgactgaacagtatcccgatgacgtggaggcctggattgaactggct
cagatccttgaacaatcggatattcagggggcactatcggcctatgggacagccacacgt
atcctccaggagaaggtgcaggctgacgttcctcctgaaatcctcaacaatgttggggca
cttcacttccgacttggaaacttgggagaagccaagaaatacttcctggcatcactcgaa
cgtgccaaggctgaagcggagcatgatgagcattactacaatgcaatctcagtcaccacc
tcatataacctggccagactttacgaggccctgtgtgaataccatgaagcagaaatatta
tacaagaatgttttaagagaacatccaaattacgtagactgttatctacgcttgggctgc
atggcaagagacaaggggaatttttatgaagcctccgattggtttaaagaagctttacaa
atcaaccaggatcatccagacgcatggtcgctgattgggaaccttcacttggctaagcag
gaatggggaccaggacagaagaagtttgaacgaatcttgaaacagccatcgactcagaat
gacacctattccatgttggccttgggtaatgtttggcttcagactttgcaccagccaacc
agagatagagaaaaggagaaacgtcaccaggaccgagcactggcaatctacaaacaagta
ctccggaacgatcccaagaatttgtatgctgccaatggcataggtgctgtattggcgcat
aaaggatatgtccgtgaggctcgtgatgtatttgcccaggtgagggaggccacagcagaa
ataagtgatgtctggttaaacttggcacatatctacgtggagcagaaacagtacatcagt
gccgtccagatgtatgagaactgcttgaagaagttttacaaacaccagagcacagaggta
ctgctgttcttagcaagagcctacttcaagtgtggaaagcttctcgattgcaaacagact
ctgctgaaggccaggcacgcggcccctaacgacaccgtgcttatgtttaacatggccttg
gtgctacagagactagccacctctgtcctccgagatgaaaagagcaatctgaaggcagtg
ttgaatgcagtcaaagaactggaacttgcccatcgatatttcaagtatctcagtaatgct
ggggataaaatgagattcgatttggctcaagctgctgcagaggccaggcagtgctctgat
ctgatgagccaagcccagtatcatgtggcccgtgcacgcaagcaggacgaagaggatcgt
gagctacgctgcaagcaagagcagcacaaggagatgttgcggatgcagctggtcaaagag
caggaggacaagaaacagaaggaattaaatgagcaacgcaagttgctggagcagcgaagt
cagtttttggagaaaaccaggaacttgttggtgttcaacgaagagatggagacttcgaag
gagaagaaaaagggaggtggaaagcgtgggaagaaaggagagtttgaagagtttgttaac
gatgattctgatgacgacttgccacttcccaagaagaaaaggaagcagagggggagcggc
agtgaacctgaggatggagacgaggacgccaatcaaaagaaaaggaagaaaaggagacga
ccccagagaggtgctgaggatggcagtgatgatgaggaaactggctcaagagctaagaaa
ccacgcaaaccaaaagtaggagagcgcaagattaaagggaagatcaaacctgaaaggctc
ccagcttccatgaagagtaaaatcaagtcaaaagcaataatttcatccagtgacgatgat
tcctctgatgagggggcactgaagatagaagaaggaaacgcacgggacactggttctgat
gaggatgaatcggctgacaagcccaggaagcgaatcgtgtccgagagtgagtcagaagat
ggacggaaccaggacaaatctgagagcgaggcgggcagcagtccgaggtcgggggctgcg
cgttcggttgctggctccgacagcgagcagtcagccaacgggcggccacaatctgatcgc
tcaggtaggagtaggtctgccagctcatcgtcagaggatgagtctcgccctgtctcgcgg
gccacgaacaattcggaacagaggtcttctgatggaggtggttcaggccagggttcagca
ggtgaatcagaccaagaatccagtcacggaggtgctcgtcaaggatccgtgtctccaaca
caatcggatgatgacagcgactga
DBGET
integrated database retrieval system
