Scyliorhinus torazame (cloudy catshark): 140384643
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Entry
140384643 CDS
T11303
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04150
mTOR signaling pathway
stoz04310
Wnt signaling pathway
stoz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140384643 (lrp5)
04150 mTOR signaling pathway
140384643 (lrp5)
09133 Signaling molecules and interaction
04519 Cadherin signaling
140384643 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140384643 (lrp5)
Membrane trafficking [BR:
stoz04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
140384643 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
LRP1-like_beta_prop
Vgb_lyase
EGF_LRP2
SGL
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
140384643
NCBI-ProteinID:
XP_072322632
LinkDB
All DBs
Position
10:complement(229239361..229473694)
Genome browser
AA seq
1607 aa
AA seq
DB search
METLLLTLVAFSHCWVATALPQLLFANRRDVRLVDAETVRPESTVVVSGLEDAAAVDFLY
SEGAIYWTDVSEEAIKQTYVNLTGNVQKVIISGLVSPDGLACDWLGKKLYWTDSETNRIE
VANLDGVSRKVLFWQDLDQPRAIALDPQHGYMYWTDWGEIPRIERAGMDGSSRSVIVDSD
IYWPNGLTIDIEEQKLYWADAKLSFIHRSNLDGSFRQKVVQGTLTHPFALTLFGETLYWT
DWQTRSIHACNKRTGANKREILISIYSPMDIQVFSQERQPHIRIPCDESNGGCSHLCLLS
PKEPFFRCACPTGVQLEKDGMICKEGAEEVLLLARRTDLRRISLDMPDFTDVILQLDDIR
HAIAIDYDPVDGYIYWTDDEVRAIRRAFLDGSGAQTLVTTEVNHPDGIAVDWIARNLYWT
DTGTDRIEVTRLNGTSRKILIAEGLDEPRAIVLNPVTGYMYWTDWGENPKIERANLDGSD
RLILVNASLGWPNGLALDYVENKLYWGDAKTDKIEVINVDGTGRRTLVEDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKHRAEREIIIDQLPDLMGLKATRVTKAFGTNPCSNNNGGCS
HLCLYVPQGPQCACPMGLELIRDMKTCIVPEAFLLFSSRADIRRISLETNNNDVAIPLTG
VKEASALDFDVSDNRIYWTDISLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWLSKNLY
WADTGTNRIEVARLDGQYRQVLVWKELDNPRALALDPSDGYMYWTEWGGKPRIVRAHMDG
TNSAALVDRVGRANGLTIDYVEKRLYWTDLDTSMIESSNMLGKQREIIADDLPHPFGLTQ
YRDYIYWTDWNLRSIERADKMNGQNRTLIQGHLDYVMDILVFHSSRQDGWNECVQTNGHC
SHLCLAVPTGYRCGCASHYILDDNNRTCSSPINFLLFSQKTAISRMVLDEHQSPDIILPV
HGLRNVKAVEYDAVDKLIYWVDGRQNVIKRARDDGSQAFVVVSGPNQNQNPDMQPHDLSL
DIYSRTVYWTCETSNTINVNRLNGKPIGIVLRGEHDRPRAIVVNAERGYMYFTNMQDRSP
KIERAALDGTEREILFSTGLIRPVDLAIDNKLGKLFWVDADLKRIESSDLSGANRLTLQD
SSILQPMGLAILGDHIYWIDRQQQMIECIEKINGDHRTRIQGRIVHLTGIHAVEELDVEE
FSSHPCSRDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPEQFTCATGEI
DCIPMAWRCDGFPECDDDSDEENCPICAANHFQCEKGQCIDGRLRCNGEVDCQDKSDEKN
CAVICRANQFRCNSGQCILKKQRCNSLPDCHDESDELLCELAKASVNEFQSHSSAIGPVI
GIILSLFVMGGMYFVCQRVVCRRYKGPNGPFPHEYISGAPHVPLNFIAPSSSQHGTFTGM
SCGKSMISSMSLMGGSNGAPLYDRNHVTGASSSSSSSTKGTFYPQILNPPPSPATDRSLY
NTEVCYSSNSPSTTRSYRHYIMQSVAPPTTPCSTDVCDSDYTTSRWKSPKYYVDLNSDSD
PYPPPPTPRSPYMSAEENCESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggagactttgttactcacgttggtcgcttttagtcactgctgggttgcaacagcattg
cctcagctactttttgctaataggcgggacgtcagattggtagatgcagaaacggtgaga
cctgaatctactgtggtggtcagtggtctggaggatgcagctgccgttgactttttgtac
tctgaaggggcgatttattggactgacgtgagtgaagaagccattaaacaaacatatgtg
aacctaactgggaatgtgcagaaagtgatcatctctggtctcgtttcaccggatggatta
gcttgtgactggttaggcaagaagctttattggacagactctgaaacaaatcggatagag
gttgccaatctcgatggagtttctcgaaaggtccttttctggcaggatctcgatcaacca
agagctattgcacttgatccacagcatgggtacatgtattggacggattggggtgaaata
ccgagaattgaacgagccggcatggatggcagcagtcgctctgttattgtggactctgat
atttactggccaaatggactgaccattgatatagaggaacagaaactttattgggcggat
gcaaagctgagttttattcatagatccaacttggatggctctttcaggcaaaaagttgtg
caaggtactctgactcatccatttgctctgacattgtttggcgaaaccttgtactggaca
gattggcaaacccgttcaatccacgcttgtaataagaggactggggcaaacaaacgggag
atacttatcagtatttactctcccatggacatccaggtcttcagtcaggagaggcagcca
cacattcgcatcccatgtgatgaaagtaatggaggatgttctcacttatgcctactttcc
ccaaaagaaccattcttcagatgtgcctgtccaactggtgtccagctagaaaaagatgga
atgatttgtaaagaaggtgctgaagaggtcttgctgcttgcgagaagaacagacttacga
cgtatctccttagacatgccagatttcacagatgttattctccagcttgatgatattcga
catgcaatagcgatagactacgatccagtggatggatatatttactggacggatgatgag
gttagagctattcgtcgtgcatttctggatggctcaggggcccagacattggtgaccaca
gaagttaaccacccagatggtatagctgtcgattggatagcacgaaatctttattggact
gatacaggaactgaccgtattgaagtgacccgccttaatgggacgtctagaaaaatattg
atagccgaaggtcttgatgaacctcgagccattgtccttaatccagtgactggctatatg
tactggacggattggggcgaaaacccaaagattgaacgtgcaaacctggatggctctgac
cgattaattttggtaaacgcctctttgggttggccgaatggcttggcgttggactatgtt
gaaaacaaactttattggggtgatgccaaaacggacaaaattgaagtgatcaatgtggat
ggaactggccggaggacacttgtggaagataaacttcctcacatatttggattcacttta
ttgggtgattatatctactggacagactggcagaggcgaagcattgaacgtgttcataag
catcgtgcagagagagaaatcatcatcgatcagctacctgatcttatgggactgaaggcc
acaagagtaacaaaagcatttggcacaaacccttgttcgaacaataatggtggctgcagt
cacctatgtttgtatgtgcctcagggtccacagtgtgcctgtccaatgggcctggaatta
ataagggacatgaaaacctgcattgtacctgaagccttcctgctgttctccagcagagca
gatatccgcagaatttccttggagaccaacaacaatgatgtggcaattccattaacagga
gtgaaggaagcatctgctctcgactttgacgtttctgataatagaatttattggacagac
atcagtttaaagaccatcagtcgtgctttcatgaatggaagctctgttgagcatgtgatt
gagtttggtcttgactatccagaaggaatggcagttgactggttgtcaaaaaacctctac
tgggcagacacgggcaccaatcgaattgaagtggcacggctggatgggcaatatcggcag
gttttggtttggaaagagttggacaatccacgtgctttggctcttgatccttccgatgga
tacatgtattggactgaatggggtggtaaaccaagaattgtccgtgcccacatggatggt
acaaacagtgctgcgctggtagacagagtggggcgtgccaatggacttactattgactat
gtggagaaaagactctactggaccgacctggacacgtcaatgattgaatcttcaaatatg
ctaggaaaacagcgtgaaatcatagctgatgatctgcctcacccttttggactcacgcag
taccgagattacatctactggactgactggaatcttcgcagtattgagcgtgctgacaag
atgaatggacaaaaccgtactcttattcagggacatttggactatgtgatggacatcctg
gtttttcattcttcacggcaagatggctggaatgaatgtgtgcaaaccaatggtcactgt
tctcatctttgccttgctgtgccaactgggtataggtgtggatgtgcatcgcattacatt
cttgatgataacaacaggacttgcagttcacccatcaacttcttgctgttcagtcagaag
actgcaattagtcgcatggtgttggatgaacaccaaagtccagatataatattgcctgta
catggtttgcgtaacgtgaaggcagtggagtatgatgctgtcgacaagttgatttactgg
gtggatggacgccaaaatgtcatcaaaagagctagagatgatggctctcaggcatttgtt
gttgtttctggaccaaaccaaaaccagaatcccgatatgcagcctcatgacttgagcctt
gatatctacagtcgtactgtctactggacttgtgaaacatccaacaccatcaatgttaat
agactcaacggaaagcccattggaatagtgcttcgtggagaacatgaccgaccaagagct
attgttgtgaatgcagaaagggggtatatgtacttcacaaacatgcaggacaggtcccca
aagattgaacgcgcagcacttgatggtactgaaagagaaatactcttttcaactggattg
atccgacctgttgatttggcaatcgataacaaactggggaaactcttttgggttgatgca
gatctgaaacgcatagaaagtagtgacttatctggtgccaatagactgacattgcaggat
tccagcatccttcagccaatggggctcgctatacttggtgaccacatttattggattgac
cgccagcagcagatgattgagtgcatagaaaagattaatggagaccatcgtacaagaatt
caggggagaatagttcaccttactggtatccatgcggtagaagaactggatgtagaagaa
ttcagttcacatccttgttcccgtgataatggtggctgctcgcatatctgcattgccaaa
ggtgatgggactccacgatgttcttgtccagtacacttggtgttgttacagaacctactg
acatgtggagaaccaccgacctgttcaccagaacaatttacatgtgctaccggagagatc
gattgcatcccaatggcatggcgctgtgatggctttccagaatgtgacgatgatagtgac
gaagaaaactgcccaatctgtgctgccaatcatttccagtgtgaaaaaggccaatgcatt
gatggacgcttacgctgcaacggtgaagtggattgtcaggataaatcggatgagaaaaac
tgtgctgtgatttgtcgtgctaaccagttccgctgcaacagtggtcagtgcattttgaag
aagcaacgttgcaactcacttcctgattgccatgatgagtcagacgagctactttgtgaa
ttggctaaagcgtcagtgaatgagttccagtctcatagcagtgctattggacctgtcatt
ggtataatcctttcactctttgtaatgggtgggatgtactttgtctgtcagcgagtcgtc
tgtcgccgctacaagggacccaatggaccttttccacacgagtatatcagtggagcccca
catgttcccctaaattttattgctcccagcagttcacagcatggcactttcactggcatg
tcatgtggaaaatccatgatcagctccatgagcctaatgggagggagcaatggggcccct
ctgtatgatagaaatcatgtgactggggcctcctccagcagttcatcgagtacaaaagga
accttctatccacagattttaaacccacctccatctccagccactgatcgttctctctat
aataccgaagtgtgctactcctccaacagcccttccacgaccaggtcttacagacattac
attatgcaaagtgtggcgccacctacaactccatgcagcactgacgtatgcgatagcgat
tataccacaagccggtggaagagtcccaaatactacgtggacctaaactccgattcagat
ccttacccaccaccccctacccctcgaagtccatacatgtcagcggaagagaactgtgaa
agttgtccaccatcaccttccacagagcgaagctactttcatctctgtcctccccctcca
tccccctgtacagattcctcatga
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integrated database retrieval system
