Scyliorhinus torazame (cloudy catshark): 140386832
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Entry
140386832 CDS
T11303
Name
(RefSeq) LIM/homeobox protein Lhx1-like isoform X1
KO
K09372
LIM homeobox protein 1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stoz03000
]
140386832
Transcription factors [BR:
stoz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
140386832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
TTR-52
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
140386832
NCBI-ProteinID:
XP_072325667
LinkDB
All DBs
Position
12:193081907..193092898
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AA seq
410 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCYQGISPSDLVRRARSKVFHLNCFTCMICNKQLSTGEELYIIDENKFVCKDDFLN
SNNSRENGALSVTACSDQSLSPDSQDHLQDDTKDSESANISDKETASNENEEQNLGAKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRPLGDRLDGADMMGNGPFNYYGDYQTEYYGPGSNYDFFPQGPP
SSQAQTPVDLGFVPSSGPGATPLGGLEHPLPGHHPSNLPGPGDGQRFTDMISHSHGDSPS
PEPGLTGPSMHSMAADVFGPGPSPSFSLTNGGYTSHLSHPPPEMNEAAVW
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactgtgcggggtgcgagaggcctattcttgataggtttctgttaaacgtcctg
gacagagcttggcacgtgaaatgtgtacagtgctgcgaatgtaaatgcaatttaacagaa
aaatgcttttcacgggaaggaaagctctactgcaaaaacgacttcttccgtcgttttggt
accaagtgtgccggctgctatcagggtatctccccgagcgatttggtgaggagagcgagg
agcaaagtctttcacctgaactgtttcacttgtatgatatgcaacaaacaactttccact
ggagaagagctctacattatagacgaaaacaaatttgtttgcaaggacgattttttaaac
agcaataattcgagagaaaacggcgcgctgtcagtaacagcatgtagtgatcaaagttta
tcaccggattctcaagatcatttacaagatgacacaaaagactcagaaagcgccaatatt
tcagataaagagactgccagtaacgagaacgaggaacagaacctgggagccaagcgccgg
ggtccccgcaccaccatcaaagcaaaacagctggaaactctcaaggcggcgtttgcagca
acccctaaacccaccaggcacatccgagagcagctagctcaggaaaccgggctaaacatg
agggtcattcaggtctggttccagaacaggaggtctaaggagaggcgaatgaagcagctg
agcgctttaggggctcgcaggcacgcgtttttccgcagccccagacggatgagacccctg
ggagatcgcctcgacggggctgacatgatgggaaacggccctttcaattactacggggat
tatcagactgaatattatggtcctggaagcaattatgatttctttcctcaaggcccccct
tcgtctcaagctcagacaccagtggatctgggctttgtgccctcctccgggcctggggcg
accccactcggcggactcgagcatccactgcccggccatcacccaagcaacctgccgggg
ccaggcgacggacagaggttcaccgacatgatctctcactctcacggggactctccgagc
ccagagccgggtctaactggaccgtcaatgcactcgatggcggcggatgtgttcgggccg
ggtcccagtccatctttctccctcaccaatgggggatacaccagccacttgtcacatccg
cctccggaaatgaacgaggctgccgtttggtaa
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