Scyliorhinus torazame (cloudy catshark): 140386880
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Entry
140386880 CDS
T11303
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03040
Spliceosome
stoz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140386880
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140386880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stoz03041
]
140386880
Spliceosome [BR:
stoz03041
]
Common components
Common spliceosomal components
SR proteins
140386880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
PRP38_assoc
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
140386880
NCBI-ProteinID:
XP_072325800
LinkDB
All DBs
Position
12:202337065..202350801
Genome browser
AA seq
255 aa
AA seq
DB search
MQNHSGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGSIRDIDLKNRRGGPPFAFV
EFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGGGGGGQTPRGRYG
PPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMSYAVR
KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRTRSRSRSRSRSRSYSPRRSRG
SPRYSPRHSRSRSRS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccacagcggcgtgatccggggcccggcgggcaacaacgactgccggatctac
gtggggaacctgccgcccgacatccgcaccaaggacatcgaggacgtcttctacaagtac
ggcagcatcagggacatcgacctgaagaaccgccgcggaggcccaccgttcgccttcgtc
gagttcgaagacccgagggatgcagaggatgctgtatatggtcgagatggttacgattac
gatggttaccgtctgcgtgttgaatttccaaggagtgggcgagggactggaagagggggt
ggtggaggaggaggaggcggcggcggcggtggcgggcagacccccagaggaagatacggg
cccccctctaggcgctcagaatatagagtggtagtatcagggcttcctccaagtggtagt
tggcaggatttgaaagatcacatgcgggaagcaggtgatgtatgttacgctgatgttttc
cgtgatggaactggtgtcgtggagtttgttcgcaaagaagatatgagctatgcagtacga
aagctggataacacaaaatttcgatctcacgagggagaaacagcatatatccgtgtgaaa
gttgatggtccaagaagtccaagctatggaagatctcgttcacgtagccgcagtcgaacc
agaagccgtagccgaagtcgcagcagaagccgtagttactctcccagacgaagcagagga
tctccccgctactcgccccgtcatagcagatcacgctcgcgtagctag
DBGET
integrated database retrieval system
