Scyliorhinus torazame (cloudy catshark): 140386928
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Entry
140386928 CDS
T11303
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03018
RNA degradation
stoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140386928
09123 Folding, sorting and degradation
03018 RNA degradation
140386928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140386928
03041 Spliceosome [BR:
stoz03041
]
140386928
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140386928
mRNA degradation factors
5'-3' decay
Lsm complex
140386928
Spliceosome [BR:
stoz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140386928
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
140386928
NCBI-ProteinID:
XP_072325937
LinkDB
All DBs
Position
2:complement(27133552..27134008)
Genome browser
AA seq
90 aa
AA seq
DB search
MALNSTNPSQLLPLELVDKCTGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEITP
EGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaactcgaccaacccctcacagttgctgccactggagctggtggacaaatgc
actggatcgcgaattcatattgttatgaaaaatgacaaggagattgtaggaacactgcta
ggttttgatgattttgtcaatatggtgcttgaagatgtcacggaatttgagatcacacca
gaaggcagaagaatcacgaaactcgaccaaattttgttaaatggaaacaacataacaatg
ctcattcctggtggtgaaggtcctgaagtatga
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integrated database retrieval system
