Scyliorhinus torazame (cloudy catshark): 140387337
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Entry
140387337 CDS
T11303
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 50-like isoform X1
KO
K28833
ubiquitin carboxyl-terminal hydrolase 50 [EC:
3.4.19.12
]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stoz01002
]
140387337
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140387337
Enzymes [BR:
stoz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140387337
Peptidases and inhibitors [BR:
stoz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140387337
Ubiquitin system [BR:
stoz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140387337
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-C4_ClpX
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
140387337
NCBI-ProteinID:
XP_072326373
LinkDB
All DBs
Position
12:2140273..2519698
Genome browser
AA seq
358 aa
AA seq
DB search
MIDHQQPQPTSCARARYYHLVPKYSNGSLVESSVPNTGTERNTGGSGQTGLGNSGNTCYM
NCILQCLCNTTPLVEYFITGAYADDVNRGRGELSNAFSALVMDIWLGDCVYVFPDEVKRV
LGKLHASFSDGTQQDAQELLLFFLNVLHNDLKRSTGVRNVETSIVTNLFQGQLSYVKLCL
SCYHKTSQTENFLSLSLPMPPDSRCSIQDCLRLFFKDEVLSSRDQPFCSFCGKKQDQTES
IQLLKAPDIIIIHLKRFESDDHGNRKLTSTVAFPLEDLDLSQYTSNPTTQQLKYHLYAVV
NHTGTLDSGHYTAYCKNPVTQTWHEFNDAKVSSISEQKIQSPAAYVLFYNCVNFQWAQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccatcaacaaccacaaccaacctcctgcgccagagctcgatactaccatctt
gtacctaaatatagtaatggctccttagtggaatccagtgtgcctaacactggcaccgag
aggaacacgggcggctctggccaaactggacttggcaattcgggtaacacctgctacatg
aactgcattttgcaatgtctctgcaacaccacaccattggtcgaatatttcataactgga
gcttatgcagatgatgtaaacagaggccgtggagaactttccaacgcattctctgcgtta
gtgatggatatctggcttggtgattgtgtctatgtctttcctgatgaagtaaagagagtc
cttggaaaattacatgcctccttttctgatggcacacagcaagatgctcaggaactttta
cttttcttcctgaatgttctccataatgatctgaaacggtctacaggagtgagaaatgtg
gaaacgtcgattgttacaaacctatttcagggacaactgagctatgtcaaattgtgtcta
agttgttaccacaaaaccagccaaacagagaattttctgagcctgtcactgccgatgcct
ccagacagcaggtgctccattcaggactgtctcagattgttctttaaagacgaggttctc
agctccagggaccagcctttctgttccttttgtgggaagaagcaggaccagacggagagc
atccagctactgaaagcacctgatattatcatcatccatctgaaacgttttgaatctgat
gaccacggcaatcggaaactgaccagcactgtggcctttccacttgaagatctagatttg
tcccaatatacaagcaacccaacaactcaacagctaaagtatcatctttatgctgttgtg
aatcacacaggcactttagatagcggtcattacactgcctactgcaagaacccagtaaca
cagacctggcacgaattcaacgatgctaaagtgagcagcatttctgagcagaaaatccag
tcaccagctgcatatgttcttttctataattgcgtgaattttcagtgggcacaatga
DBGET
integrated database retrieval system
