Scyliorhinus torazame (cloudy catshark): 140388150
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Entry
140388150 CDS
T11303
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
140388150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140388150
Ubiquitin system [BR:
stoz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
140388150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
140388150
NCBI-ProteinID:
XP_072327972
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Position
2:complement(64636354..65028649)
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNTLK
VPECRLADDLGNLLESSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLDKMADNLLAAADKYALDRLKVMCEETLCSNLSVE
NVAEILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWSNNHATDVMETEGWKSMI
HSHPHLVAEAFRALATAQCPPFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggtgccaactcctcctccacctggagagatgtctagtggacctgtggcagag
agttggtgttacacacaggtaaaagtggtaaaattctcttacatgtggaccatcaataac
ttcagcttttgtcgagaagaaatgggcgaagtgttaaagagttcaactttttcatctggg
ccgaatgataaaatgaagtggtgcctcagagtaaacccaaagggtttagatgaagaaagc
aaagactacctttccttatacttgcttttagttagttgtcccaaaagtgaagtccgagcg
aagtttaaattctcgttattgaatgcaaaaagggaagaaacaaaagctatggaaagtcaa
agggcgtaccgatttgtccagggcaaggactggggtttcaagaagtttatccgtagagat
tttcttctagacgaagcaaatggtcttcttccagatgataaacttaccctgttctgtgaa
gtgagtgtagttcaagactctgttaatatatccggtcaatcaaatatgaatacattaaag
gttcctgaatgtcggctggcagatgatttggggaatctattggaaagttctagatttaca
gactgctccctttatgttggaggacaagaattcaaagctcacaaatcaattttagcagct
cggtcgcctgtttttaatgctatgtttgaacatgaaatggaagaaagcaagaagaacaga
gtagaaataaatgatgtagatcctgaagtgtttaaggaaatgatgagatttatctataca
ggaaaagcaccaaacctcgataaaatggctgacaatctattggcagctgcagacaaatac
gcactagatcgtctaaaggttatgtgtgaagaaaccttgtgtagtaacctatcagttgaa
aatgttgcagaaattctcattcttgcagatttgcacagtgcagagcagctgaaggctcaa
gcaatagacttcattaacaggtgcagtgttctccgacaacttgggtgtaaggatggaaaa
aactggagtaacaaccatgccacagatgtgatggagacagaaggctggaagtcgatgatc
cactcccaccctcatttagttgcagaggccttccgagcattggcgactgcacagtgccca
ccatttggtattccacgcaaacggttaaaacagtcataa
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