Scyliorhinus torazame (cloudy catshark): 140388166
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Entry
140388166 CDS
T11303
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
stoz
Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140388166 (snrpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140388166 (snrpf)
03041 Spliceosome [BR:
stoz03041
]
140388166 (snrpf)
03032 DNA replication proteins [BR:
stoz03032
]
140388166 (snrpf)
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
140388166 (snrpf)
Spliceosome [BR:
stoz03041
]
Complex A
U1 snRNP components
Sm proteins
140388166 (snrpf)
U2 snRNP components
140388166 (snrpf)
Complex B
U1 snRNP components
140388166 (snrpf)
U4/U6.U5 tri-snRNP components
140388166 (snrpf)
Complex C
U2 snRNP components
140388166 (snrpf)
DNA replication proteins [BR:
stoz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
140388166 (snrpf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
140388166
NCBI-ProteinID:
XP_072328023
LinkDB
All DBs
Position
13:84405257..84415600
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALAGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccattgaatccaaaaccattcctcaatggcttaactggcaaaccggtgatg
gtgaagttaaagtggggaatggaatacaagggctacttggtgtcagttgatggatatatg
aacatgcagctggcgaacacagaagaatatattgatggtgctttagcgggacatcttggc
gaagtcctaataaggtgtaacaatgttctgtacatcagaggagttgaggaagaggaagaa
gatggagaaatgagagagtaa
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