Scyliorhinus torazame (cloudy catshark): 140388288
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Entry
140388288 CDS
T11303
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
140388288 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
140388288 (lrrn1)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_9
ig
LRR_EndoS
LRR_1
fn3
V-set
LRRCT
Ig_2
Pur_ac_phosph_N
DUF1358
Peptidase_M73
LRRNT
LRR_Zer-1
LRR_NXF1-5
Sp38
LRR_6
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
140388288
NCBI-ProteinID:
XP_072328278
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Position
13:complement(134895605..134940125)
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AA seq
715 aa
AA seq
DB search
MCKKNCSTICHVMMGFLTLCLIEASPQPSECPQLCVCEIRPWFTPQSTYREAATVDCNDL
RLTRIPSNLSADTQVLLLQSNNIAKTTDEFQQMFNLTELDLSQNNFTNIRDVGLTNLTQL
TTLHLEENQIADMPDYCLQDLANLQELYINHNQINSISANAFSGLRNLLRLHLNSNKLRL
IDSRWFESTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMELTEIPGNALVGLDSL
ESLSFYDNKLVRVPHLALQKVPALKFLDLNKNPVHKIQEGDFRNMLRLKELGVNNMVELV
SIDRYALDNLPELTKLEATNNPKLSYIHRYAFREVPSLESLMLNNNALNALYQKTVDNLP
NLREVSIHSNPIRCDCVIQWMNSNKTTIRFMEPQSMFCAMPPEYRGQQVKEVLMQETAEQ
CLPMIAHDTFPNHLNVDVDITVSLDCRAMAEPEPEIYWVTPLGSKITVDTLSDKYKLSNE
GTLEISHIRIEDSGRYTCVAQNSEGADTRVATIRVNGTLLDGTQVLKIYVKQAESHSILV
SWRVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPSTEYEVCLTVSNV
HQQTQKSCVNVTTKGVTFSLDISDQGTSTALAAVMGSMFAIISIASIAVYIAKRLKRKNY
HHSLKKYMQKTSSIPLNELYPPLINLWEGDSEKEKDGSSDVKPTPVDTSRSYYVW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaaagaactgttccaccatttgtcatgtaatgatgggttttctgactctttgt
ctaattgaagcttctccgcagcccagtgaatgccctcagttgtgcgtttgtgaaattcgg
ccatggttcacaccacaatcgacgtacagagaagccgctactgtggactgcaatgatctt
cgcttgaccagaattccaagtaatctttccgctgacacccaggtgctcttgcttcagagc
aacaatattgccaagacaactgatgaatttcagcaaatgtttaacctcacagagctggat
ctctctcagaataattttaccaatatccgtgatgtaggcctgaccaatcttactcagctc
accactctacaccttgaggagaaccagatagcagatatgcctgattattgcttacaagat
ctcgccaacctccaggaactgtacatcaatcacaaccagattaacagcatatcagcaaat
gccttttctggcttaaggaatttactaagacttcatctgaattccaacaaactgagactg
attgacagccgttggtttgagtcgacccctaacttggagatccttatgattggagaaaac
cctgtaattggcatcctagatatgaacttcaaaccgctaagcaatttgagaagtctggtt
ttagcaggaatggaactcacagaaatccctggaaatgctttagtgggattggatagcctc
gaaagtctctccttctatgataataaactggtaagagtgcctcaccttgcacttcagaag
gtgccagccttgaaattccttgatctgaacaagaaccctgttcataaaattcaagaaggt
gacttcagaaatatgcttcgcttgaaagaactcggtgttaacaatatggttgaacttgtt
tctattgacagatatgcgctggataacctacctgaacttacaaagttggaagctacaaat
aaccctaaattgtcatacattcatcgctatgcctttcgggaagttccttcccttgaaagc
cttatgcttaataataatgcattaaatgccctgtatcagaagactgtggataacctcccc
aatctacgtgaagtaagcattcacagcaacccgatcaggtgtgactgtgttattcaatgg
atgaattcgaacaaaaccaccattcggttcatggagcctcaatctatgttttgtgctatg
ccaccagaatacagagggcaacaagttaaagaagttctcatgcaggagactgcggaacaa
tgtcttccaatgattgcgcatgacacttttccaaatcacctgaatgtagatgttgatata
acagtctccttggattgtcgtgcaatggcagagcctgaacctgaaatctactgggtcaca
ccacttggaagtaaaatcacagtagacaccctgtcagataaatataaactgagcaatgag
gggactctcgaaatttctcacattcgcattgaggactctggccgatacacttgcgttgct
cagaactctgaaggagctgatacaagagttgcaaccattcgtgttaatggaaccctccta
gatggaactcaggttttgaaaatatatgtgaagcaagctgaatcccactctatcttagtt
tcatggagagtgaactccaatgtcatgacttccaatttgaagtggtcatcagccaccatg
aagattgataacccccacattacatacaccgcaagggttcccgttgatgtccatgaatat
aacctgacacatctccaaccttcgacagaatatgaggtctgtcttactgtatctaacgtc
caccagcagacccagaaatcatgtgtcaacgttactacaaagggggtgacattctcactg
gatatttctgaccaaggaacaagcacagccctagcagctgtaatgggctcaatgtttgcc
ataattagcattgcttcgatagctgtttacattgccaaacgcctcaagcggaagaactac
caccattcgctgaaaaagtacatgcagaagacctcttccatccccttgaatgaactttat
ccaccacttataaatctatgggaaggggatagtgagaaagaaaaagatggctcttccgat
gtgaaacctacacccgttgacacatcaagaagctactatgtgtggtaa
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