Scyliorhinus torazame (cloudy catshark): 140388339
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Entry
140388339 CDS
T11303
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03013
Nucleocytoplasmic transport
stoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140388339 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
140388339 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140388339 (thoc7)
03041 Spliceosome [BR:
stoz03041
]
140388339 (thoc7)
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140388339 (thoc7)
Spliceosome [BR:
stoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140388339 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
UPF0193
KIF21A
OVT1
DASH_Dad2
COG6_N
ivWA
Peptidase_S10
FapA
PCRF
Motif
Other DBs
NCBI-GeneID:
140388339
NCBI-ProteinID:
XP_072328440
LinkDB
All DBs
Position
13:160244863..160705363
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AA seq
211 aa
AA seq
DB search
MLTWLGAAMSVTDDEVIRKRLLIDGDGAGDDRRINLLLKSFIKWCNSGSQEEGYSQHQRM
LGTLGQCEFSMGKTLLVYDMNLREMLNYEKISKDIESNIAAAHDKISECKKQILQAKRIR
KNRQEYDALAKVIQQHPDRHETLQQLEALGKELEHLSHIKESVEDKLELRRKQFHVLLST
IHELQQTLESDEKLSDGEDSPETRMEIQNGH
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgttgacctggctcggcgccgccatgtcggtgacagacgatgaagttatacgcaagcgg
ctcctaattgatggagatggtgctggtgatgatcgacgcattaacctactgctgaaaagc
ttcattaagtggtgtaattcaggatcgcaagaggaggggtatagccaacaccagcgcatg
cttggtacattgggacaatgtgaattttccatgggaaaaacattgcttgtgtatgatatg
aacctgagggaaatgctgaactatgagaaaatatcaaaagacatagaaagtaacattgca
gccgcacatgacaagatctcagaatgtaaaaaacagattttacaagcaaaacgaattcgg
aaaaatcgtcaagagtatgacgcattagcaaaagtaatccagcagcatcctgatagacat
gaaaccttacagcagctagaggcacttggtaaggaactagaacatctttctcacattaaa
gaaagtgtggaagataagcttgaactaagaagaaaacagttccatgttctactcagcact
atacatgaactacaacagacattggaaagtgatgagaaattgtcggacggtgaggactct
ccagagactcgcatggagatacaaaatggacattag
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