Scyliorhinus torazame (cloudy catshark): 140388433
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Entry
140388433 CDS
T11303
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
stoz
Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03320
PPAR signaling pathway
stoz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140388433 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
140388433 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stoz03000
]
140388433 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stoz03310
]
140388433 (pparg)
Transcription factors [BR:
stoz03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
140388433 (pparg)
Nuclear receptors [BR:
stoz03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
140388433 (pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
FAM163
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
140388433
NCBI-ProteinID:
XP_072328681
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All DBs
Position
13:complement(185932259..186130696)
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AA seq
476 aa
AA seq
DB search
MVDTQLPLWPINFAMGTMDLSELANHSHSFDIKPFATVDFSTVSPVNYEDHASTSFRIDE
NSSDYKYDERYLDYQSTIKVEPSSLNEKSGKEPSFSKLQEDSSNSALSIECRVCGDKASG
FHYGVHACEGCKGFFRRTIRLKLMYDKCDLNCRIQKKNRNKCQYCRFQKCLAVGMSHNAI
RFGRMPQAEKEKLLAEISSDADQLSPEFADLRSLAKHMFESYNKSFPITKAKSRAIMAGK
TGDISPFVIYDMNSLKAGEERIKFKQTSLQEQNTEVEIRIFQRCQFRSVEAVREITEFAK
SIPGFINLDLNDQVTLLKYGVHEVIFSMLASLMNKDGLLIAAGQGFMTREFLKSLRKPFC
DIMEPKFEFAMKFNSLGLNDCDIAIFIAVVILSGDRPGLLNVKPIEELQDSILQALALQL
KINHPDSPQLFAKLLQKMTDLRQIVTEHVQLLHTIRKTEAEMSLHPLLQEIYKDLY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtagatacacaactgcctttatggcccatcaattttgccatgggcacaatggacctg
tcggaacttgccaaccattctcattccttcgatataaagccatttgctacagtggacttt
tccactgtttctccagttaattacgaggatcatgcttcaacctctttcagaattgatgag
aattcttcagactataaatatgatgaaagatatctggattatcaaagtactattaaagtt
gaaccttcttccttaaatgaaaaatctggaaaagaaccttcattttcaaagttacaagaa
gattcatcaaattcagccctgtctattgaatgtagagtatgtggagataaggcctcaggg
ttccattatggggtccatgcatgtgaaggatgtaagggatttttccggagaacaatccgg
ttgaagttgatgtatgacaagtgtgacctaaactgcaggattcagaagaagaacaggaat
aaatgtcagtactgcaggtttcagaaatgcctggctgtcggcatgtcgcataatgcaatt
agatttggcagaatgccacaagctgaaaaggagaaactcctagccgaaatctccagcgat
gcagaccaactcagccccgagtttgctgatctccgttctcttgcaaaacacatgtttgag
tcgtacaataagtcttttcctattacaaaagctaaatctcgagcaattatggcaggaaag
acaggagacatatcgccatttgttatttatgacatgaattccttaaaggcaggagaggag
cgcatcaaattcaaacaaacatcactgcaagaacagaacacagaagtagaaatacgaatt
tttcaacgctgccaattccgttcagtggaggctgtaagggaaatcactgaatttgccaaa
tctattcccggattcataaatcttgacctaaatgaccaagttactcttcttaaatacggt
gtccatgaggtcatattcagtatgctggcctccctgatgaataaagatggacttctgatt
gctgctggccaggggtttatgactcgtgaatttttaaagagcctgaggaaacccttttgt
gacatcatggagcccaaatttgaatttgccatgaagttcaatagcttggggctgaatgac
tgtgacattgcaatatttattgccgttgtcatactcagtggagatcgacctggattgcta
aatgttaaaccaattgaagaactgcaggacagcattctacaagcacttgcccttcaactt
aagataaaccaccccgattcaccacaattatttgcaaaactacttcaaaaaatgacggat
ttaagacagattgtcactgagcatgtacagcttctgcacactatcaggaaaacagaggca
gaaatgagtcttcatccactcctgcaagaaatatacaaggacttgtattag
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