Scyliorhinus torazame (cloudy catshark): 140388556
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Entry
140388556 CDS
T11303
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82 isoform X1
KO
K14962
COMPASS component SWD2
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140388556 (wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140388556 (wdr82)
03036 Chromosome and associated proteins [BR:
stoz03036
]
140388556 (wdr82)
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140388556 (wdr82)
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
140388556 (wdr82)
COMPASS/SET1 complex (yeast)
140388556 (wdr82)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD_LRWD1
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SPT8
PAC11
Beta-prop_IFT140_1st
Tricorn_2nd
Beta-prop_ACSF4
MinC_C
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
140388556
NCBI-ProteinID:
XP_072329054
LinkDB
All DBs
Position
13:complement(205474270..205497259)
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENTDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFHGHSKRVVALCMSPVDD
TFMSSSLDKTIRLWDLRSPNCQGLMHLQGRPTCSFDPEGLIFAAGVNSEIIKLYDLRSFD
KGPFATFKMQYERTCEWTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFGGYNNNKG
ISLEASFTPDSQFVMIGSEDGKVHVWNAESGLKVAVLDGKHTGPVSCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggataacgtgctgcgcagcttccgagtggccaaggtgttccgggagaac
acggacaagatcaactgcttcgacttctcgcccaacggggagacgctcatctccagcagc
gacgacgactccatcgtcctgtacgactgccaggagggcaaaccaaagagaacactgtac
agtaagaagtatggggtagacctgatcagatacacacatgcagcaaacacagtggtttac
agctctaacaaaattgatgatactatccggtacttgtcacttcatgacaataagtacatt
agatacttccatggtcacagcaagagagttgtagcattatgtatgtctcctgtggatgac
accttcatgtccagttccttggataaaaccatcagactgtgggacctccgatcacccaat
tgtcaaggcttaatgcatcttcaggggaggccaacgtgttcttttgatcccgagggactt
atatttgcagctggtgtgaattctgaaataattaaactttatgatctacgttcgttcgac
aagggtccttttgccacatttaagatgcagtacgagcggacctgtgagtggacaggattg
aaattcagcaacgacggaaaactgatgctggtgtctaccaatggtggcatggtcagactc
attgatgcgtttaaaggagcagtactgcaaacatttgggggatacaacaacaacaaaggt
attagtttggaagcatcattcacaccagattctcaatttgtgatgataggatcggaggat
ggtaaagttcatgtttggaatgcagaaagtgggttaaaggtggctgttttggatgggaaa
catacaggtcctgtctcctgccttcagtttaatcccaagttcatgacatttgccagtgca
tgttctaacatggcattttggctacctacgattgatgactga
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