Scyliorhinus torazame (cloudy catshark): 140389020
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Entry
140389020 CDS
T11303
Name
(RefSeq) uncharacterized protein
Organism
stoz Scyliorhinus torazame (cloudy catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
140389020
NCBI-ProteinID:
XP_072329288
LinkDB
All DBs
Position
14:38898563..39176823
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AA seq
1667 aa
AA seq
DB search
MAPSGFRCPVPIVPFSLWLLLLQFSLLWGAHAGQIDYTGSCGGRDCSVCQCFPAKGAQGQ
PGSLGRHGPQGSSDLQGPRGPPGLKGQNGDRGSPGFAGIKGDSGPTGVPGFLGLDGIPGF
PGLQGARGPPGPDGCNGSRGDPGLPGSEGFPGRPGLPGMQGPKGPKGDSIAATFSYRGLP
GDQGFPGPIGFPGLPGIAGLRGIEGPRGPPGFPGHPGSQGLRGDQGMGFPSQKGEKGEQG
DPGHVELNQPMEEIVFKGDQGEKGPRGSPGPIGFPGPSDLPGAPGEKGEKGIIGFPGDRG
YLGREGLPGVSGRKGQRGPSGRRGQDGHPGREGDSGEPGPAGAPGPILCDSPRGDPGRQG
LRGEIGEPGLPGSPGQLGRPGETGAGFPGLAGFPGVDGPQGEKGQKGNAECPIPKGIPGP
PGPRGLVGPPGPRGANGSPGFICEVPGPPGLPGPKGNQGIPGQQGMRGLKGDPGDCAHIP
DTPGTPGNSGIPGIPGNPGNPGRKGEQGDHGAPGSDGLPGPAGSPGRDGFPGAKGQRGIS
SQRAKKGEKGNQGDPGGRGAPGRLGQPGRHGNAGLIGRPGIPGDAEHGPPGDKGLRGLPG
RSAIPGPPGPSGLGYPGPKGQTGPVGDIGFSGEQGSKGQKGLKGDTSCPRRPGPPGPKGM
PGPPGSTGSSGIPGRPGRIGFDGPKGLKGEPGLLTYPGESGFQGSIGDPGRQGPPGTSEN
GAPGSPGFPGVPGEKGPPGDSYDGPSGAPGQFGRRGPTGASGDTGGPGPSGRQGRNGIPG
FPGRKGFQGDRGLTGQPGNPGPPGFPAEKGEPGPVGPPGRPGLRGSQGISLKGFSGNPGP
LGPTGLKGVQGIPGNPGIPGSIGMQGQPGPVGNSGTPGFLGPTGRKGSQGIRGFLGAPGP
QGPPGIPGRPGLQGDEGIKGPVGERGIKGSNGERGDPGEDTLTPIFYEKGNWGISGTPGE
HGFTGPRGEKGLPGNPGIPGFSGRLGFPGSVKGFLGMNGPPGRPGRQGLIGHRGQKGIIG
FPGIKGEKGDNGQLGSPGTPGEPGCKGSKGDTGDSRSLPGFPGTKGQIGDRGEPGANGLP
GQPGPTGFDGRSGASGIKGIHGVPGVPGFPGYQGPPGDSGRPGPIGLPGIQGKPGSVGPP
GPQGSKGQPGSPGLHGLNGLQGQKGTLGSPGLSEPGSMGSPGSPGSKGVKGDPGHSGSPG
RCPTGRIGDRGPEGPRGPAGPPGLRGPPCNFNSVGPPGDQGPPGFDGPPGPRGFPGDPGI
PSTTFQADPGDPGVSGRTGAQGPPGERGTCGLSGPPGPPGRKGEMGDQGFYGFPGLDGPM
GFPGDQGERGCAGSPGPKGPPGTVILGNGIDISLYKGDPGPPGPSGRTGPPGKIGFSGSR
GLPGPKARKGEHGRPGTDGSPGQLGPPGNVGMPGQQGITGDQGPPGPQGPPGNPGPCPPF
SAGFLIVVHSQSQEIPTCPQNMHSLWQGYSLLYLEGQEKSHNQDLGLAGSCLPMFSTMPF
AYCSIDEVCHYATRNDKSYWLSTTSPVPMMPLIEQEIEPYISRCSVCEAPSVAVAVHSQD
QTIPPCPSGWVSLWTGYSFLMHTGAGAEGSGQSLTSPGSCLEDFRSTPFIECQGARGTCH
YFTDKYSFWLTTVQPSHQFGLLAPSETLKIEHLQRQRVSRCQVCLKR
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaagcggattcagatgtcccgtcccgattgtccccttcagcctttggttgctg
ttgctccaattctccttgctctggggagctcacgcgggtcagatcgactacactggttcc
tgtggcggaagggattgttcagtttgccagtgttttccagctaaaggagcccagggccag
ccaggctcattaggaagacatggcccacaaggttcctccgaccttcaaggaccacgaggc
ccaccaggattaaaaggacagaacggagatcgtggatcacctggatttgctggaataaaa
ggggatagtggtccgactggtgttcctggctttctaggattggatggcattccaggtttt
ccaggactgcaaggcgcacggggacctcctgggccggatggctgcaatggatctcgagga
gaccctggcctccctggaagtgaagggtttccaggaagacctggtttaccgggaatgcaa
gggccaaaagggccaaaaggagattccatagctgctacattttcttataggggtttaccg
ggagatcaaggattcccaggaccaataggctttcctggtcttccaggaattgcaggtctt
cgagggattgaaggaccgagaggtccacctggttttccagggcatcctggttcacaaggc
ttacgaggtgaccagggcatgggttttccaagccaaaaaggcgagaagggtgaacaaggt
gacccaggacatgtcgaactcaaccagcccatggaagaaattgtctttaaaggagatcag
ggtgaaaaaggccctagagggtcgcctgggcctattggatttcctggaccttcagatctc
cccggtgcccctggtgaaaagggtgaaaaggggatcattggtttccctggggatcggggt
tatcttggacgggaaggcttgccaggtgtttcaggaagaaagggacaacgtgggcccagt
ggtagacgtggacaagatggccatccagggagagagggagacagcggagagccaggacct
gctggagcaccaggacctatattgtgtgactctccgagaggagacccaggtaggcaaggt
ttacgaggcgagataggagaaccaggactgccaggctcccccggtcaactaggcagacca
ggtgaaactggagcaggttttccaggtctggcagggtttccaggtgtagatggtcctcaa
ggagagaaaggacagaaaggaaatgctgaatgtccaataccaaagggaatccccggccct
ccagggccccgaggcttagtaggacccccaggtccccgtggtgcaaacggcagcccaggt
tttatttgtgaagtaccgggtcctccagggctgccaggtccaaagggtaaccaaggaatc
ccaggtcaacaaggaatgcgtggtttaaaaggagatccaggggattgtgcacacatcccg
gacactccaggaaccccaggaaattcaggaattccaggaattccaggaaatcctggaaat
ccaggaagaaagggagagcagggtgaccatggagcgcctggatcagacggattgccagga
cctgctggatctcctggaagggatggttttccaggtgcaaagggccagagagggatatca
tctcagcgtgcaaagaaaggagagaaaggaaatcaaggtgatccaggaggtcgaggtgct
cctggaagactgggacaacctggccgacatggaaacgcaggcctcataggccgacctgga
atcccaggtgatgcagagcatggacctccaggggacaaaggcctacggggtcttccagga
cgttcggccattccaggaccccctggaccctcgggtctgggttatcctggtccaaaaggc
caaaccggccctgtgggagatataggcttttcaggagagcaaggttctaaaggccaaaaa
ggcctgaaaggtgacacttcgtgtccaagacgtccaggcccaccaggccctaaaggaatg
ccagggcctccaggatcaacaggttcttcagggattcctggcagaccagggagaattggt
tttgatgggcctaaaggtctgaaaggtgaaccgggcctgctgacatatcctggagaatca
ggttttcaaggatcaattggtgacccaggtcgtcaagggcctcctggaacgtcagaaaat
ggagctcctggctctccaggctttccaggtgttccaggagaaaaaggtccacctggtgat
tcatatgatggtccatcaggggctcctggacaatttggaaggagaggcccaacaggtgca
agtggagatactgggggcccaggaccttcaggaaggcaagggcgcaatggaattccggga
ttcccaggacgtaaaggattccaaggtgatcgaggcctgactggtcaaccaggaaatcct
ggtccaccaggtttccctgcggagaaaggagaaccaggtccagttggacctccaggacgt
ccgggtttacgtggctcccaaggtatatctctgaaaggattttcaggaaatccaggtccc
ttaggcccaacagggttaaagggagttcaaggaattcctggaaatccgggaatacctggt
tcaattggcatgcaaggccagccaggtcctgtgggaaacagtggaacaccaggatttctt
ggtccaacaggcaggaaaggaagccaaggtattcggggatttctaggagcaccaggtcca
caaggacctccaggaattcctggacgaccaggactacaaggggatgagggaataaaaggc
ccggttggagaaagaggaattaaaggaagcaatggggaacgaggggacccaggggaagac
acgctgactccgatcttttatgaaaaaggcaactggggaatctcaggtactcctggtgaa
catggatttacaggaccacgtggtgaaaagggattgcccgggaatccaggaatccctgga
ttttctggcaggcttggttttccaggctccgtgaaaggttttcttgggatgaatggacca
ccgggtcgaccagggagacaaggtttaattggacatagaggccaaaaaggaatcattgga
tttcctggaattaagggggagaagggtgacaacggacaattgggatctcctggaacacca
ggtgaacctggttgtaaaggatcgaaaggtgacacaggcgattctcgtagtttgccagga
ttccctggaaccaaaggacagattggtgaccgaggcgagccaggtgccaatggtttacca
ggccagcctggtcccactggttttgatggaaggtcaggcgcatccggaataaagggaatc
catggggttccaggggttccaggtttcccagggtatcaaggacctccaggagattcagga
cgcccaggaccaataggattacccggtatccaaggaaaaccaggatctgtgggacctcct
ggcccgcaaggttccaaaggtcaacctggatcacctggtttacatggactaaatggattg
caaggacaaaaaggaactcttggatctccaggactgagtgaacctggatctatgggatca
ccaggatcacctggatcaaaaggtgtaaagggtgacccaggacattcaggaagcccaggt
cgatgcccaacgggtcgaataggagatcgaggaccagaaggtccacgtgggccagcagga
cctccaggtttaagaggaccaccttgcaattttaactcagttggaccaccgggagatcaa
ggtccaccaggttttgatggtccaccaggtcctcgtggttttcctggtgacccagggatt
ccctccacaacatttcaagcggatccgggagatccgggcgtatcaggtagaactggcgct
caaggtccaccaggagagcggggcacatgcggcttaagtggtcctccagggccaccaggt
cgaaaaggtgaaatgggtgaccaggggttctatggatttcctggacttgatggaccaatg
ggttttccgggtgatcaaggtgaacgtggttgtgctggctcaccagggcctaaaggcccg
cctggtacagttatcctgggcaatggaatcgatataagtctttataaaggagacccgggg
ccaccaggaccctccggtcgtacaggaccaccaggaaaaatcggattttctgggtcacgt
ggccttccaggacccaaagcacggaaaggagaacatggacggccaggtactgatggctca
cctggtcaacttgggccaccaggaaatgtcggcatgcctggacaacagggaatcactggg
gaccaaggccctcctggaccacaaggcccaccaggaaatccaggtccatgccctccattc
tctgctggcttcttgattgtggtgcatagtcagtcacaggagatacctacatgtcctcaa
aacatgcatagcctttggcaagggtacagtttgctttatctggaaggacaagaaaagtct
cacaatcaagatcttggtctagctggctcttgtctgccaatgttcagtactatgccattt
gcatattgcagcattgatgaagtttgtcactacgccactagaaatgacaaatcgtattgg
ctgtccacgacctcaccagtccccatgatgccgctcattgagcaagagatcgaaccttat
atcagcaggtgttcagtctgcgaagcgccttctgtcgcggtggctgtacacagccaggac
cagaccatccctccttgcccttcagggtgggtcagcctttggactggttactcctttttg
atgcacacaggagctggtgccgaaggaagcggtcagtctctaacgtcacctggcagctgc
ctggaggatttccgctcaacaccattcattgagtgccaaggagcgcgtggcacctgccac
tactttaccgataaatacagcttttggctgacaactgtgcaaccaagccaccagtttgga
ctactggctccgtcagaaactctgaaaatcgagcatttacaaagacaaagagttagtaga
tgtcaggtttgtctgaaaagataa
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