Scyliorhinus torazame (cloudy catshark): 140389123
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Entry
140389123 CDS
T11303
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04142
Lysosome
stoz04144
Endocytosis
stoz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140389123 (cltcl1)
04142 Lysosome
140389123 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140389123 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140389123 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stoz04147
]
140389123 (cltcl1)
Membrane trafficking [BR:
stoz04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
140389123 (cltcl1)
Exosome [BR:
stoz04147
]
Exosomal proteins
Proteins found in most exosomes
140389123 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_IF140-IFT172
Gp18_dom_I
TPR_Vps8
Motif
Other DBs
NCBI-GeneID:
140389123
NCBI-ProteinID:
XP_072329417
LinkDB
All DBs
Position
1:19201774..19285691
Genome browser
AA seq
1681 aa
AA seq
DB search
MAQILPIRFQEHLQLQSQGVNPANIGFSTLTMESDKFICIREKVGEQAQVVVIDLNDPTN
PIRRPISADSVIMNPASKVIALKAGKTLQIFNIEMKSKVKAHNMVEEVTFWKWISLNTVA
LVTETAVFHWSMEGDSQPQKMFDRHASLAGCQIINYRTDLQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFADFKLEENPAPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFTKRAVDVFFPPEAQTDFPVAMQIGTKYGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EELFARKFNTLFAQGNYSEAAKVAASAPKGILRTPDTIRKFQTVPAQPGQASPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPDQGLQFAQMLVQDE
EPLANINQIVDIFMENNLIQQCTSFLLDALKNNRPSEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDSERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEEVIKNLITVVRGQF
STDELVGEVEKRNRLKLLLPWLEARIHDGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSSVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQTIFQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNN
VFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFD
VNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSA
YMEVVKAANKNDNWEDLVKFLQMARKKAKESYVETELIFALAKTNRLSELEEFVNGPNNA
HIQQVGDRCYDDGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEV
CFACVDGEEFRLAQICGLHIVIHADELEELISYYQDRGYFEELISLLEAALGLERAHMGM
FTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVI
TMMSHPTDAWKEGQYKDIIAKVANVELYYKALQFYLDFKPLLINDLLLVLSPRLDHTRAV
SFFSKVDQLLLIKPYLRSVQSHNNKSVNEALNNLLTEEEDYQGLRTSIDAYDNFDNIILA
QRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDCLYKDAMQYTAESKDTELSEKLLQW
FLEEGKQECFASCLFTCYDLLRPDVVLELSWRHNIMDFAMPYFIQVMREYLSKVDELMEK
VDKLDASDSLRKDEDQVTEPAPLVFGQQLMLTAGSTAVPPQPGYAYGYPAGYAQPAYGFN
M
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctccccatccgcttccaggagcacctgcagctccaaagccaaggggtg
aatcctgccaacattgggtttagtacccttaccatggaatcggacaagttcatctgcatc
agggagaaggtgggagaacaggcgcaagtggtggtgatcgacctgaatgatccaacaaat
ccaattcggcgcccaatatctgctgacagtgttatcatgaacccagcaagcaaagtgatt
gctctgaaagctggaaaaaccctacagatatttaacattgaaatgaagagcaaagtgaaa
gcacataatatggttgaagaagtaacattctggaagtggatctctttgaacactgttgcc
ctagtaactgagactgcagtattccattggagcatggaaggtgactctcaaccacagaag
atgtttgacagacatgcaagcttggcaggatgtcagatcattaactacaggacagacctt
caacagaagtggttgcttctaattggaatttctgcgcagcagaacagagtagttggtgca
atgcagctgtactctgtagaccgaaaggtgtctcagccgattgaggggcatgctgcagcc
tttgctgacttcaaattggaagagaatcctgcaccatcaaccctcttttgctttgcagtc
cgcagtcaggctggagggaagttgcatattatagaagtaggtcaaccagctgctgggaac
cagcctttcacgaagagagcagtggatgtgtttttccctcccgaggcccaaactgacttt
ccagtagcaatgcagattggaacaaaatatggagttatatatcttatcaccaaatatggc
tatatccacttgtatgatttggagtctggtgtttgcatctacatgaaccgtattagtgct
gagaccatttttgtgactgctccccacgaacctacatctggtattattggagtcaataaa
aaaggacaggtattatctgtctgtgtggaagaagaaaatattgttaactatgccactaat
gtgctccaaaacccagacttggctctgcgtatggctgtaagaagcaaccttgctggtgct
gaggagctctttgcacgaaagtttaatactttgtttgcacaaggaaactattctgaagct
gcaaaagtagctgcatcagcaccaaagggtattctgcggactccagacaccattagaaaa
ttccagactgtcccagcccagccagggcaagcttcgcctcttttacaatattttgggatc
ctcctcgatcagggacagctgaataagtatgaatcattggaactctgccgacctgtcctg
caacaaggccgcaagcagctgctggaaaaatggctaaaagaagacaagctggagtgttct
gaggagctgggggacctggtgaagacggctgatcccacactagctttaagtgtctatctc
cgtgccaatgtgccaaataaagttatacaatgttttgcggagactgggcaattccagaaa
attgttctctatgcaaaaaaggttggttacagtcctgactgggtcttcctgctaagaaat
gtcatgcgggtgagccctgaccaggggcttcagtttgcacagatgcttgtccaggatgag
gagcctctagctaatatcaatcagattgtggatatatttatggagaataacctgatccag
cagtgtacgtctttcctattggatgctttgaagaataatagaccttctgagggtcactta
caaactcgtttgcttgaaatgaatctgattcacgctccacaggttgctgatgcaatcctt
ggaaaccagatgttcactcactatgaccgagcccatattgcccagctgtgcgaaaaggct
ggcttgctgcagagggctttggagcattatacagatctgtatgatattaagcgtgctgtt
gtacacactcaccttttgaaccctgagtggcttgtgaacttcttcggcgcactctctgtg
gaagattctcttgagtgcttgcgtgccatgttgtcggccaacatccgccagaatcttcag
ctttgtgtgcaagtagcatccaagtaccacgagcaacttggcactcagtcgctggtggaa
ctttttgaatcatttaagagttacgaagggttattttatttccttggatccattgtgaat
ttcagtcaagagccagatgttcacttcaagtatattcaggcagcatgtaagactgggcag
attaaggaagttgaacgtatatgtcgtgagagcaactgctatgattccgaacgtgtgaaa
aacttcctgaaggaagctaagttgacagaccaactcccactgatcattgtatgtgatcgg
tttgactttgttcatgacctagttctgtacctgtaccgcaacaacctgcagaagtatatt
gaaatctatgttcagaaggtgaatcctagcaggcttccagtagtggtgggtggactgctg
gatgtggattgctctgaagaagttattaaaaatcttatcactgtagtccgtggacagttc
tcaactgatgagcttgtgggtgaagtggagaaaaggaacagattgaaattgctgcttccg
tggctggaggctagaattcatgatggttgtgaagaacctgctactcacaatgctttggct
aagatctatattgatagcaataacaaccctgagcgtttcctgcgtgaaaacccgttctat
gatagttctgtggttggcaagtactgtgagaagagggatccacatttggcttgtgttgct
tatgaaaggggccagtgtgatctggatctcataaaggtttgcaatgaaaactctctgttc
aagagtgaggctcgctatcttgtacgtagaaaagacccagagctttgggccaatgtcctt
gaagaaaataatccctttagacgacagctgattgatcagactatttttcaggttgtccaa
acggccctgtctgaaacccaggatcccgaggaagtatctgttactgtgaaggcctttatg
actgcagaccttcccaatgagctgattgaactgcttgagaaaatagtcttggataacaat
gtctttagtgaacacagaaatctacagaacctcctgattctcactgctattaaagccgat
cgcacccgtgttatggagtacattaatcgcctggacaactatgacgctcctgatattgcc
aacattgctatcagcaatgagcttttcgaagaagcctttgcaatctttcggaagtttgat
gtgaacacctctgcagtgcaggttctaattgagcacattggaaatcttgaccgtgcttat
gagtttgcagaacgttgcaatgagccagctgtatggagtcagctggccagagcgcagttg
caaaaggatttggttaaagaagccatagactcctatataaaggctgatgatccatctgct
tatatggaggttgtgaaagcagccaacaaaaatgataactgggaagacctagtgaagttt
ctgcaaatggcccggaagaaagcgaaggagtcctatgtggagactgagctgatatttgct
ctggcaaagactaaccgtctgtctgagttggaggagtttgtcaatggacccaataatgcc
cacattcagcaagttggtgatcgctgctatgatgatggcatgtatgatgcagcaaagtta
ctttacaacaacgtgtccaactttgctcgcttggcttccactctggtacatttaggagag
taccaagctgctgtggacagtgcccgcaaagctaacagcaccaggacttggaaagaggtt
tgttttgcctgtgttgatggtgaagagttccgtctggcccagatctgcggactacacatt
gtcatccatgcggatgaactggaggagttgatcagttattaccaggatcgagggtatttt
gaggaactaatctccctcttggaagctgcattgggtttggaacgggctcatatgggaatg
ttcacagagttggcaatcctgtattctaaatttaagcctcaaaagatgcgtgaacacttg
gagctcttctggtccagagttaatatcccaaaggtacttcgtgctgcagagcaggcccac
ctttgggctgagctggtcttcctgtatgataaatatgaagagtatgacaatgcagtaatt
actatgatgagtcacccaacagatgcttggaaagaagggcagtacaaagacatcattgcc
aaggttgccaatgtagaattatattacaaggctctacagttttatttggatttcaaaccg
ctattgatcaatgatttattgctggtgttgtcgccacgtttagaccataccagggcagtc
agttttttcagtaaggtggaccagttgctgctaattaaaccatacttgcgctctgtccag
agtcacaataacaaatctgtgaatgaagctctgaacaaccttcttactgaagaggaggat
tatcagggtttgcgtacatctattgacgcgtacgataattttgacaatattatccttgct
cagcgattggaaaagcatgaactaattgagtttagacgcattgctgcttatctctacaaa
ggtaacaatcgctggaaacaaagtgtggaactttgcaaaaaagactgcttatacaaggat
gcaatgcaatatacagcagaatccaaggacactgagctctctgagaagctcttgcagtgg
ttcttggaggagggcaagcaagaatgttttgcatcctgcttatttacgtgctatgattta
ttacggcctgatgtagttttggagctgtcgtggaggcataacatcatggactttgcgatg
ccgtactttattcaagttatgagggaatatcttagcaaagttgatgaattaatggaaaag
gtcgataaacttgatgcttcagatagcttgaggaaagatgaagaccaagtgactgaacca
gctcctctagtatttggtcagcagctgatgttgacggcaggctccactgcagttcccccg
cagcctggttatgcttatggttatccggctggctatgcgcagcctgcttatggcttcaac
atgtag
DBGET
integrated database retrieval system
