Scyliorhinus torazame (cloudy catshark): 140393057
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Entry
140393057 CDS
T11303
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140393057 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stoz03036
]
140393057 (pcgf5b)
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
140393057 (pcgf5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-Nse
Actin_micro
zf-RING_5
zf-RING_10
zf-rbx1
zf-RING_6
TRAF3_RING
DUF8589
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
140393057
NCBI-ProteinID:
XP_072335126
LinkDB
All DBs
Position
16:127107795..127448319
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AA seq
235 aa
AA seq
DB search
MATQRKYLVREFNAFITCYICKGYLIKPTTVTECLHTFCKSCIVQHFEDTNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLKETEKRQEEEFWKKNKPQENGEDNEGPKAKKAKI
EEEEDQEDQDYHRSDPQIAICLDCLRNNGQSGDNTVKGLMKKFIRCSTRVTVGTIKKFLS
LKLKLPSTCELDVLCNGEIMGKDHTMEFIYMTRWRLRAENSYPMVLQYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaaaggaaatacctagtgagagaatttaatgccttcatcacttgttacatc
tgcaagggctatcttatcaagccaactacagtgactgagtgtctacacactttttgcaaa
agttgtattgttcaacattttgaagacacaaatgactgtccaaaatgtggaattcaagtt
catgaaactaatccattggaaatgttaaggttggacaatacgctagaagaaattatattt
aaactggtgcctggtcttaaagaaacggaaaaacggcaggaagaagaattctggaaaaaa
aataaaccacaagagaatggagaagataatgaaggccccaaagcgaagaaagctaaaatc
gaagaagaagaggaccaagaagatcaggattatcacagaagtgatccacagattgccatt
tgtctagactgtctccgcaacaatgggcaatcaggggataatactgtaaagggcttaatg
aagaaatttatccgctgctcaaccagagtcacggtggggacaataaagaaatttctgagt
ttgaaattaaaacttcctagcacttgtgagctcgatgttctatgcaatggggaaattatg
gggaaggatcataccatggaattcatatatatgactagatggagactcagagctgaaaat
tcttatccaatggtactacagtatcggccaaggattgactttggttag
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