Scyliorhinus torazame (cloudy catshark): 140393254
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Entry
140393254 CDS
T11303
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04110
Cell cycle
stoz04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140393254 (smc3)
04114 Oocyte meiosis
140393254 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stoz03036
]
140393254 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stoz00535
]
140393254 (smc3)
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140393254 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
140393254 (smc3)
Proteoglycans [BR:
stoz00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
140393254 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
CreS_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
140393254
NCBI-ProteinID:
XP_072335622
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All DBs
Position
16:complement(177803626..177906306)
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AA seq
1210 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESINLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQEARDKMEDIERLARELKAKILSMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDEMAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSAVKEKEEN
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAITKDL
EDTEANKERNLEQYSKLDQDLAEVKARVEDLDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRGATGKAILNGIDSINKVLEHFGRKGINTHVISGYHGIVMNNF
ECDPAFYTSVEVTAGNRLFYHIVESDEVSTKILMEFNKQNFPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYIQRFDKAYKHVFGKTLICRSMEVSTQLARAFNMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDARKAEEELTELEAKLNENLRRNIEKINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLDDQKRVDALNDEIRQLQQDNRQLLNERIKLEGIMTRLETYLSENLRKRL
DQVEQELNELRETEGNTVLNATTSELENINKRVRETTARAEELDSLIDKIEGETKDRQKS
MDRWKNMEKDHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNQELKKYSHVNKKALDQFVNFSEQKEKLMKRQEELDRGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFTKLVPGGKASLVMKKGDVEGSQSQDEGEGSASQSSV
PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ
ALDAQHRKAVSDMISELSAHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAK
DFVEDDTTHG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtgattatccagggtttccgcagctacagggatcaaacaattgtt
gatcctttcagctccaaacataatgttatagttggccgaaatggatcagggaaaagtaac
tttttctatgcaattcagtttgtgcttagtgatgagttcagccaccttcgccctgagcag
agacttgctcttctgcatgaaggaactggacctcgtgttatttctgcatttgttgaaatc
atatttgacaattcagacaataggttacctattgataaagaagaggtttctctccgtcgt
gtcattggagcaaagaaagatcagtattttttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttttggaaagtgctgggttttccagaagcaatccgtactacattgtcaag
caaggaaagattaatcaaatggcaacagctccagattcgcagcgactcaaacttttgcga
gaagttgctggtaccagagtatatgatgaacgtaaagaggagagtatcaatcttatgaag
gaaaccgaggggaagagagaaaagattaatgaattgttgaaatatattgaggagcgtctg
catacactggaagatgagaaggaagagttggcgcagtatcagaaatgggataagatgaga
agagcgcttgaatatactatctacaatcaggaactgaatgagactcgtgccaaacttgat
gagctttctgcaaaacgagagaccagtggagagaagtcacggcaactgcgtgatgcacag
caagaagccagagataaaatggaggatatagagcgactggcacgtgaactgaaagcaaaa
atcttatccatgaaggaagagaaagaacagctgagtgctgaacggcaggagcagattaaa
caaaggactaaacttgagttgaaagcaaaggacctacaggatgaaatggctggaaacagt
gaacaaagaaaacgtcttttgaaggaaaggcagaagctattagaaaagatagaagagaag
caaaaagagcttgcagaaacagaaccaaaattcagtgctgtcaaagaaaaagaagaaaat
gggatagcgaggttggcacaggccacccaggaaagaacagatttgtatgcgaagcagggt
cgaggcagtcagtttacgtcaaaagaggagagggataaatggatcaagaaagagctgaag
tcactcgatcaagctatcaatgataaaaaacgacaaattgctgcaattaccaaggacctg
gaggatactgaagccaataaagagagaaatttggagcagtacagtaaacttgatcaggat
ctggctgaagtaaaagcgcgagttgaggatcttgacaagaagtactatgaagtgaaaaac
aggaaggatgagctgcaaagtgaaaggaattatttgtggcgggaagaaaatgctgagcaa
caagcattagcagcaaagcgagaagagttggaaaagaaacaacagcttcttcgaggtgca
acaggaaaggctattttgaatggtatcgatagtattaacaaagtgttggaacactttggt
cgtaagggcatcaacacacatgtcataagtggatatcatggaattgtaatgaataacttt
gagtgtgatccggctttttacacctctgtggaagtcactgctggaaaccgactgttctat
cacattgtggaatctgatgaagttagtacaaagattttgatggaatttaataaacaaaac
tttcctggcgaagtcactttccttccactcaacaaactggatgtgcgagacaccgcttat
ccggaaaccaatgatgcaattcccatgataagtaaacttcgatacatacagagatttgat
aaagcttataaacatgtgtttggaaaaacactgatatgtcgtagcatggaggtatctact
cagcttgccagagcatttaatatggattgcataactttggaaggtgaccaggttagtcat
cgaggtgccttaactggtggctattatgatactcgaaaatcaagacttgagcttcagaag
gatgcacgaaaagcagaggaagaattaactgaactggaagcaaagctgaatgaaaacctc
cgtagaaacattgaaaagattaataatgagatcgatcaattgatgaaccaaatgcagcag
attgaaacacagcagagaaagtttaaggcatcacgagacagcattctgtcagaaatgaag
atgttgaaggagaagaggcagcagtctgagaaaaccttcatgcctaagcaacggagtttg
caaagtttggaggccagtttgcacgctatggagtcaacacgggaatccttaaaagctgag
cttggtacagacctgctttcacagctcagtctggatgatcaaaagagagttgatgcactc
aacgacgaaatccgacaactccaacaggataatcgacagctattaaatgaacgaattaag
ttggaaggtataatgaccagactggagacttacctcagtgaaaatttaagaaagcgcttg
gaccaggttgagcaggagttaaatgagctgagagaaaccgagggcaacactgttctaaat
gccacaacttctgaactggagaacattaataagcgagtgagagagaccactgcacgtgcc
gaagaactggacagtttgatagacaaaatagaaggagaaaccaaagatcgtcagaaaagc
atggaccgctggaaaaacatggagaaagatcacatggaagccatcaatcatgacaccaag
gagctggagaagatgacaaaccggcagggtatgctgcttaagaaaaaagaggaatgcatg
aagaaaatcagagaattgggctcattgccacaagaggcctttgaaaaataccaaacactg
agtctcaaacagctgtttcgcaagttggaacagtgtaatcaggagttgaagaagtacagc
cacgtcaacaagaaagccttggaccagtttgtgaatttctcggaacagaaggagaaactt
atgaaacggcaagaggagcttgaccgtggccacaaatccatcatggaacttatgaacgta
ctggagttgagaaagtatgaagccatacagcttaccttcaaacaggtatctaagaatttc
agtgaggtattcaccaagttggtgccgggtggtaaagcatcactggttatgaagaaaggc
gatgtggaaggaagccagtcacaggatgagggtgaaggtagcgcatctcagagcagtgtt
ccgtctgttgaccaattcacaggagttggaattcgggtatcttttacagggaagcaagga
gaaatgagagaaatgcagcagctttctgggggtcagaaatctctcgtggcactggcttta
atctttgccattcagaaatgtgacccagctcccttttacctctttgatgaaattgaccag
gcgctggatgctcaacacagaaaagctgtttcagatatgatttctgaactctctgcgcat
gctcagttcattaccactacattcaggccagaattgcttgaatcagcagacaagttttat
ggagtgaaattcaggaacaaggtcagtcacattgacgtgatcacagctgaacaagctaaa
gattttgtggaagatgatactacacatggataa
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integrated database retrieval system
