Scyliorhinus torazame (cloudy catshark): 140394049
Help
Entry
140394049 CDS
T11303
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140394049
03012 Translation factors [BR:
stoz03012
]
140394049
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140394049
Translation factors [BR:
stoz03012
]
Eukaryotic type
Initiation factors
eIF-3
140394049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR19_1st
RRM_1
Beta-prop_Aladin
WD40_Prp19
Beta-prop_ELP1_1st
Beta-prop_RIG_2nd
B-prop_COPA_B_2nd
DUF5734
Motif
Other DBs
NCBI-GeneID:
140394049
NCBI-ProteinID:
XP_072336946
LinkDB
All DBs
Position
17:complement(107865672..107914976)
Genome browser
AA seq
687 aa
AA seq
DB search
MKETSDDEAREAEDEVAELEEPEEGFSDPEDFVDDISDEELLGDTLKDQPQEADGIDSVI
VVDNVPQVGPDRLEKLRNVIQKIFSKFGKITNEFYPDSDGKTKGYIFLEYSSPACAVDAV
KNADGYKLDKQHTFRVNLFTDFDKYMTISDDWEIPPKQPFKDFGNLRYWLEDPDCRDQCS
IIYESGDRTAILWNDIKEPVVIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQ
IQRFSHQGVQLIDFSPCERYMVSFSPLMDTKDDPQAIIIWDALTGQKKRGFHCESSAHWP
IFKWSHDGRFFARMTQDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGDNVISFWVPEDK
DIPARVTLMQFPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTLKGIMGLVTNFEIF
RMREKQVPVDVVEMKEGIIAFAWEPNGSKFAVLHGETPRISVSFYHVKNNGKIELIKVFD
KQQANSIFWSPQGQFVALAGLRSMNGALAFYDTSDCTLMNVAEHYMASDVEWDPTGRYVV
TSVSWWSHKVDNAYWMWTFQGRLLQKNTKDRFCQLLWRPRPASLLSQDQLKQIKKDYKKY
SKIFEQKDRLSQSKASKELVDKRRKMMEEFHKYREKTSQNYAEQKPQRLELRGGVDTDEL
DSNVDDWEEETVEFFVTEEIIPVGDQE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacgagcgacgacgaggcccgggaggctgaggatgaggtggcagagttggag
gaaccggaggaaggcttcagcgaccctgaagatttcgtggacgacatctcggatgaagaa
ctgctgggtgataccttaaaggaccagcctcaagaagctgatggcatagactctgtgatt
gtcgtggataatgtacctcaagttggaccggatcgactagagaaactccgaaatgtcatc
cagaaaatcttttccaagtttgggaaaatcacaaatgagttttacccagattcagatggg
aagacgaaggggtacattttcttggaatacagttcaccagcatgtgctgtggatgcagtg
aaaaatgcagatggatacaagttagacaaacagcatacttttcgtgtcaacctcttcact
gattttgataagtacatgaccatcagtgatgattgggaaattccgccaaaacaaccattc
aaagattttgggaatcttcgatactggttagaggatccagattgtcgagatcaatgcagt
atcatctacgagtctggagatagaacggctattttgtggaatgacataaaggaacctgtt
gtcattgaagaacgtgcacgttggacagagacatatgttcgttggtcccccaagggcacg
tacttagcaacgttccatcagcgtggtattgctctttggggtggggagaagttcaagcag
atccagcgttttagccaccaaggtgtccagcttatcgatttctctccatgtgaaagatat
atggtgtcatttagtcctttaatggacactaaagatgatcctcaagccatcatcatttgg
gatgcattgacaggtcagaagaaaagagggtttcattgtgaaagctcagctcattggcct
atattcaaatggagccatgatgggaggttttttgcacgaatgacacaagacactcttagt
atttatgaaacaccctcaatgggactgttggacaagaagagcttgaagattagtggaata
aaggatttctcatggtctcccggtgataacgttatttcattttgggtgccagaggacaaa
gatattccagccagagttactctaatgcagtttccaacacggcaagaaataagagtgcgc
aatctgttcaatgtggtggactgtaaattacactggcagaaaaatggagattacctgtgt
gtgaaagtagatagaacactgaagggtattatgggtcttgtgactaactttgaaatcttc
agaatgagggaaaaacaggttcctgtggatgttgtggaaatgaaagagggtattattgct
tttgcttgggagccgaatggaagtaaatttgctgtgctacatggagagacacccagaata
tcagtatccttctaccatgtgaagaataatggcaagattgaactcattaaggtgtttgat
aagcagcaagctaatagcatcttttggagtccgcaaggacaatttgtggcattggctggt
ctaaggagcatgaacggtgctttggcattttacgacacgtcagattgcacgctgatgaat
gtagctgaacattatatggcttctgatgttgaatgggacccaacaggacgatatgtggta
acttcagtatcgtggtggagtcacaaggtggataatgcatactggatgtggacgttccag
gggcgtctcttacagaagaacaccaaggatcgtttctgtcaactgctgtggagacccaga
ccagcttccctgctctcgcaggatcagcttaagcaaatcaaaaaagattataagaaatac
tcaaaaatctttgaacagaaagatcgtttgagtcagtccaaggcctccaaggaattggta
gataagcgacgcaagatgatggaagaattccataaatatcgtgagaagaccagtcaaaat
tacgcagagcagaaaccccaacgtctagaactccgaggaggtgtggacacggatgagctg
gacagtaacgttgatgactgggaggaagagaccgttgaattttttgtcacagaagaaatt
atccctgttggagatcaggagtag
DBGET
integrated database retrieval system
