KEGG   Scyliorhinus torazame (cloudy catshark): 140394099
Entry
140394099         CDS       T11303                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
stoz  Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04144  Endocytosis
stoz04517  IgSF CAM signaling
stoz04530  Tight junction
stoz04810  Regulation of actin cytoskeleton
stoz05100  Bacterial invasion of epithelial cells
stoz05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:stoz00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    140394099
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140394099
  09144 Cellular community - eukaryotes
   04530 Tight junction
    140394099
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    140394099
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    140394099
   05100 Bacterial invasion of epithelial cells
    140394099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stoz04131]
    140394099
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:stoz04812]
    140394099
Membrane trafficking [BR:stoz04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    140394099
Cytoskeleton proteins [BR:stoz04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     140394099
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 EIF3I Rax2 PEP5_VPS11_N Beta-prop_SPT8
Other DBs
NCBI-GeneID: 140394099
NCBI-ProteinID: XP_072337043
LinkDB
Position
17:117268347..117351118
AA seq 370 aa
MSRHQFLFEPITCHAWNQDRTQIALSPNNHEVHIYKKSGNQWIKNHELKEHNGRITGIDW
APQSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPQENKFAVGSGARLI
SVCYFEGENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDTKP
SATPWGSKMPFGQVMAEFGGAGSGGWVHSVSFSATGNRLAWVSHDSTVSIVDAGKNMTVS
QTKTEFLPLLSVIFVSENNIVAAGHDCCPMLFMYDDRGSLTYISKLDIPKQSIQRNMSAM
QRFHNLDRRATTEDRNTMLETLHQNSITQVSVYEGDKRDCRKFCTTGIDGAMTIWDLKSL
ESSIQGVRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtctcgtcatcaattcttgtttgagccaatcacatgccatgcttggaatcaagatcga
acacagatagcacttagccctaataaccatgaggttcatatttataagaaaagtggaaac
cagtggatcaagaatcacgaactgaaggagcataatggtcgaataacaggcattgactgg
gctccccagagtgatcgcattgtaacctgtggcgctgaccgtaatgcttatgtatggagt
cagaaagacggtgtatggaagccaacattggtcattctacgaattaaccgcgcagcaacg
tttgtgaagtggtctcctcaggaaaataagtttgcagtaggtagtggtgctcggctgatc
tcagtgtgctactttgaaggagaaaatgattggtgggtgagtaaacacatcaagaagcca
attcgttctactatccttagccttgactggcatcccaataatgtcttactggcagcaggc
tcgtgtgacttcaaatgcagagttttctctgcttacatcaaagaagtagacacaaagcct
tctgccacaccctggggttccaaaatgcctttcggacaagtgatggcagaatttgggggt
gcaggtagtggtggttgggtccacagtgtttctttctctgccacaggaaaccgcctggca
tgggtcagccacgacagcactgtatctattgttgacgctggtaaaaatatgacggtttct
caaacgaagaccgaatttctccctctgttgagtgtgatttttgtctctgagaataacata
gtggcagcaggccatgattgctgtccgatgctgttcatgtatgatgatcgtggttcattg
acttacatctccaagctagacattccaaagcagagcattcaacggaacatgtctgccatg
cagcgcttccacaatctggatagaagggcaactacagaggatcgaaataccatgctcgag
actctccaccagaacagtatcacccaagtctcggtatatgaaggtgataaaagagattgt
cggaagttttgcactactggtattgacggcgcaatgacaatttgggatttgaagtctctg
gaatcctcgatccaaggtgtacgcatcatgtga

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