Scyliorhinus torazame (cloudy catshark): 140394101
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Entry
140394101 CDS
T11303
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04144
Endocytosis
stoz04517
IgSF CAM signaling
stoz04530
Tight junction
stoz04810
Regulation of actin cytoskeleton
stoz05100
Bacterial invasion of epithelial cells
stoz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140394101
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140394101
09144 Cellular community - eukaryotes
04530 Tight junction
140394101
09142 Cell motility
04810 Regulation of actin cytoskeleton
140394101
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140394101
05100 Bacterial invasion of epithelial cells
140394101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140394101
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stoz04812
]
140394101
Membrane trafficking [BR:
stoz04131
]
Others
Actin-binding proteins
Arp2/3 complex
140394101
Cytoskeleton proteins [BR:
stoz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
140394101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
PEP5_VPS11_N
eIF2A
WD40_MABP1-WDR62_1st
RMC1_N
EIF3I
Rax2
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
SH3_3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
140394101
NCBI-ProteinID:
XP_072337046
LinkDB
All DBs
Position
17:117371720..117415841
Genome browser
AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIAICPNNHEVHIYKKEGSKWSRIHELKEHSGHVTGIGW
APESNRIVTCGTDRNAYVWSLKGNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQDNDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSSDFKCRVFSAYIKEVEEKP
SPTPWGSKMPFGELMFESSGTGGWVHGVCFSDSGNRLGWVSHDSTVCVTDANKKTTVAIL
DTESLPLLTVTFITESSLVAAGHDCYPVLFTYDNAKDTVTFGKKLDIPKQNVQQGLSALA
KFRNLDKHASADDNNVHLETLHKNSISQISVLEGGKKNCLKFCTTGMDGGMAIWDIKTLE
ADLKGLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccacagcttcctgcttgaaccaatcagctgtcatgcctggaataaagaccgg
acccaaattgctatctgtcccaacaaccatgaggtccacatttataagaaagaagggtcc
aagtggagcaggattcacgagctgaaggagcatagtggacatgtgacagggattggctgg
gctccggagagtaatcgcattgtgacctgtgggactgaccgtaatgcctatgtctggtcc
ttgaagggcaatgtttggaagccaactcttgtcattctaagaatcaaccgtgcagccaga
tgtgtgaagtggtcaccaaaggaaaacaagtttgcggtgggcagcggatcacgactgatt
tccatctgctattttgagcaagacaatgattggtgggtttgcaagcatatcaagaagcca
attcgttccaccatactgagtctggattggcatcccaacaatgttctgttggcagctgga
tcctctgacttcaaatgcagagttttctctgcctacatcaaggaggttgaggagaaacca
tcgcccacgccatggggttcgaagatgccctttggagagctgatgttcgagtccagcggg
actggtggctgggttcatggagtctgtttctcggacagtgggaaccgtttgggctgggtc
agccatgacagcactgtgtgtgtcaccgatgccaacaagaagacaacggttgctatcctt
gatacagaatctctacctctcctgactgttacattcatcaccgagagcagtttagtagca
gcgggtcatgactgctacccagtgctgttcacttacgacaacgccaaagacacggtgaca
ttcggcaagaaactggatattcccaaacagaatgtgcagcagggactgtcagctctggcg
aagttcaggaacctggacaaacacgcgtcagccgatgacaacaacgtccaccttgagacc
ctgcacaagaacagcatcagccaaatctccgttctcgagggtggaaagaagaattgtttg
aagttttgcaccactggtatggatggtggaatggcaatctgggatattaagaccctggag
gctgatttgaaaggtttgaagattgtctga
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