Scyliorhinus torazame (cloudy catshark): 140394128
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Entry
140394128 CDS
T11303
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
140394128 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stoz03036
]
140394128 (hdac4)
Enzymes [BR:
stoz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140394128 (hdac4)
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
140394128 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
140394128
NCBI-ProteinID:
XP_072337108
LinkDB
All DBs
Position
2:183340509..184120651
Genome browser
AA seq
1058 aa
AA seq
DB search
MSSTVDISTPLPPQVQPSTPMDLRLDHQFTVPAADPNVREQQLQQELIALKQKQQIQRQL
LIAEFQRQHEQLSRQHEAQLQEHIKHQQDLLALKHQQEILEQQRKLEQHRQEQEMEKQHR
EQKLLLLKNKEKGKESAVASTEVKLRLQEFVLNKKKAAAHRAINHSIPNDPRFWYGKTQH
GSLDQSSPPQSSISASYNHPVLGMYDPKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPL
LRRKDGSAITTLKKRPMDVPDSACNSAPGSGPSSPNNSSNNITTENGIAGSATNMPTEST
LPHKLVARDGSVTQLPLYTSPSLPNITLGLPATGPSSGASGQAEGERVGMQGLPLNTPFI
AGTHLPHYIATLDKDGSSGHTPLLQHMVLLDQPTPQSPLVTDWYLSGLGALPIHPQSLVG
PDRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQLVIQQQHQQFLEKHKQQFQQQQIHIN
KLMPKPSEQPRQHESHPEETEEELREHQAMPEEPYSDRGVNPNESTTMNKVVQVKQEPIE
SDEEGEEQHEMEQRKRQAEQQQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSYSGH
RPLSRAQSSPASATFPISVQEPPSKPQFTTGLIYDTLMLKHHCTCGNTNSHPEHAGRIQS
IWSRLQETGLRSKCECIRGRKASLEELQVVHSEQHALLYGTNPLNRQKLDSSITPMFVML
PCGGLGVDSDTIWNEIHSSSAARLAAGCVIELVLKVATKELKNGFAVVRPPGHHAEESTP
MGFCYFNSVAIATKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGN
FFPGSGAPDEVGTGAGVGFNLNMAWTGGLDPPMGDAEYLTAFRTVVMPIANEFAPDMVLV
SSGFDAVEGHPAPLGGYKVSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACV
SALLGNELEPFTQEVLQQRPNPNAVRSIENVIEIQSKYWKSLQRFSSTAGYSLIEAQKCD
KEEADTVTAMASLSMGVKQGSNAEKRPDDEPMEEEPPM
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtactgttgatataagcacaccattgcctcctcaagtccaacccagtacacca
atggatcttcggcttgatcatcagtttacagtgccagctgctgaccccaatgtacgagaa
cagcaactacaacaggaattgattgctctaaaacaaaaacagcaaatccaacgtcagctt
cttatagcagaatttcagagacaacatgagcagctctcacggcaacatgaagcccaacta
caggagcacataaagcatcaacaggacttgcttgcattgaagcaccaacaagaaattttg
gaacagcaacgtaaactggagcagcatcgtcaggaacaagagatggagaaacaacacaga
gaacaaaaattactgctgctaaaaaataaagagaaaggaaaagaaagtgcagtagcaagc
acagaagtaaagttgagacttcaagagtttgtcctaaataaaaagaaagctgcagcacat
cgggcaataaaccattccattccaaatgacccaaggttttggtacggaaaaacccagcat
ggctcattagaccagagttctccacctcaaagcagcatatctgcctcatataatcatcca
gtcctcgggatgtatgatcctaaagatgacttcccgcttagaaaaacagcatctgagcca
aacctaaaggtacgctccagactaaaacagaaagtggcagagagaagaagtagcccttta
cttcggagaaaagatggcagcgccataaccacacttaaaaagagacccatggatgttcca
gattcagcttgtaacagtgctcctggatctggcccaagctcccccaacaacagctccaac
aacatcactacagaaaatgggatagcaggatcagcaaccaatatgccaactgagtctact
ttgcctcacaaactggttgctcgagatggctcagtgacgcaattgcctctgtatacttca
ccatcattgcccaacataactttaggtctgccagccacaggtccctctagtggagcctct
ggccaagcagaaggtgagagagtgggcatgcaaggactcccattgaacactccatttatt
gctggtactcatctgccacactacatcgccactttggataaagatggcagtagtgggcat
acacctctcttgcagcatatggtcttgttggaccaacctacaccccagagtccactagta
actgactggtatctttcaggattgggagcgttgcccattcacccacagtcgcttgttggt
ccagacagagtttcaccttccatacacaagcttaggcagcaccgtccattagggagaacg
cagtcagcaccgctaccacagaacgcacaggctttgcaacagctggtcatacagcagcaa
catcagcagtttctggagaaacataaacagcagttccagcagcaacagattcacattaac
aagctgatgccaaagcctagcgagcagcccaggcagcatgaaagtcaccctgaagaaaca
gaagaggagctcagagaacatcaggccatgccagaagaaccatactcagacagaggtgtc
aatccaaatgagtccacaactatgaacaaggtggtacaggtcaaacaagaaccaatcgaa
agtgatgaagaaggggaagagcagcatgagatggagcaaagaaagaggcaggcggagcaa
cagcaggaactacttttcagacagcaagctcttctccttgaacagcaacgtattcatcaa
cttcgcaattatcaagcatccatggaagcggcagggattccagtgtcctatagcggacat
cgtccactctcccgagcgcagtcatcacctgcttctgccacttttcctatctctgttcaa
gaaccacccagtaaacctcaattcactacaggtctaatatatgatacactgatgctaaaa
caccattgtacctgtggaaatacaaatagtcatccagaacatgctggcagaatccagagt
atctggtctcgactccaagagactggcctacgcagcaaatgtgagtgtatcagaggaagg
aaagcatcactggaagaactacaggttgtccattcggagcagcatgcattactttatggc
acaaacccattgaatcgacagaagcttgacagttccatcaccccgatgtttgttatgctt
ccttgtggcggtcttggagttgacagtgatacaatttggaatgagatccactcatctagt
gctgcacgcttggcagcaggctgtgtgattgagcttgttcttaaagtggcgactaaggaa
ttgaagaatggatttgcggtcgtgaggcctcctggacaccatgcagaggagagcacacca
atgggattctgctacttcaattccgtggccattgctaccaaactcctgcagcagaggttg
aatgtcagcaaaatccttatagtggactgggacgtgcatcatggtaatggcacccaacag
gcgttctacagtgatcccaacgtgttgtacatttcattgcatcgttatgatgatggcaac
ttcttccctggcagtggagccccagatgaggttgggactggcgcaggggtagggtttaac
ctcaatatggcctggactggaggtctggatccaccaatgggcgatgctgaatatttgact
gcatttaggacagtagtgatgcccattgccaatgaatttgcccctgatatggtacttgtg
tcctctggatttgatgcagtagaagggcaccctgcccctcttgggggttacaaagtctct
gctaaatgttttggctaccttaccaaacagctgatgggcctggctggaggccgtgtcgtg
ctagccctggaagggggccatgatctcactgccatttgtgatgcctcagaagcatgtgtt
tctgctttacttggaaatgagcttgagccattcacacaagaagtgttacagcaaagacca
aatcccaatgctgttcgttctattgagaacgtaatcgaaatacaaagtaaatactggaag
tcgctacaacgcttttcctctactgcgggctattcactgatagaggcacaaaagtgtgat
aaggaagaagctgacacagtaacagctatggcttcattgtcaatgggtgttaaacaaggg
tctaatgctgagaagaggccagatgatgaacccatggaggaagaaccacctatgtag
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integrated database retrieval system
