Scyliorhinus torazame (cloudy catshark): 140394267
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Entry
140394267 CDS
T11303
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
140394267
NCBI-ProteinID:
XP_072337423
LinkDB
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Position
17:154894921..155133012
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AA seq
1704 aa
AA seq
DB search
MTRLRQFGLLLWKNYLLQKRQVLVTIVEISLPLIFAAILITLRYRVSSMPYPNATTYPSF
FIYDIPYFPQHPTVKWSMVYIPSNVTAVERIAKLVKNSLRRVVKLVGFQTEAQFNKFIRS
ENQSTGNILVALVIDHDFKHQDERLPLQVKYHLRFKYSPLNAPLGELSTLNPNRDRDWHT
QFLFPLFQVPGPREQYFKDGGSPGYYREGFLATQLATDRAIIKYHASKAAAKLLPLFPIE
MLRFPFPPYIDDIFILAIQTQLSLLVMLSFTYTALNVTKAIVLEKETKQKEYMKMMGLNN
WLHWLAWFFKFLIFLIISVSLMTVLFCVKMSEHGAVLNNSDPTLIFVFLLMYAMSTISFS
FMISVFFSQANIAAAVSGFLYFFSYIPYFFIAPRYPSMTATQKVASCLISNVGMALGCQI
IGMFEGKGTGIQWSNMNSPVSVDDSFTIAHAMAMLLFDSLGYNLVTWYVEAVFPGEYGIP
QAWYFFILPSYWLGKPRSEYIKVNREDEETDRILNTEYMEDDPVGIEAGIRIKDLSKVFK
VGNQIKTAVSHLNMNLYQGQISVLLGHNGAGKTTTLSILTGLFPPTSGNAYINGYDICQD
MPLVRQSLGLCPQHDVLFDDLTVEEHLFFFSGLKGCQSGKIREEVNRMLRILKFEDKRKA
RIKTLSGGMKRKLSIGIALIGNSKVVMLDEPTSGMDPLSRRAAWDLLQHQKYGRTILLTT
HFMDEADLLGDRILIMANGQLQCCGSSLFLKNKYGAGYHMVIVKEPHCKVVKITDLVKSF
VPKAVLQTTAGAELSFVLPNESTDRFETLFTELEKKKNVLGIASYGASVTTMEEVFLRVG
KLVDSSIDLQAINLPAIQYQHERRTSDWSIGEKTSLNDLMDFTDDGDYHPIEYSSVKLNT
GVILYLQQFYSMFMKRATYSWRNWKVFTAQFMVPLIFASFALIVAKTFPGPQDSPPLNLT
LEKYGPTIVPYAVRFNANILPKELAQTYRDVLQKQLGIPRQTEDDIINYLLNSSVKKGPS
FHEQCVIAADFHSSLTSGTRIRVLFNNLGYHTSATSLMLVNNALFKMLVGPAASISTTNY
PQPRNITEQAIDQLHENRTGFALAFNLMYGMAFLASTFTLLLVSERTIKSKHIQLISGLH
IINFWMSALLWDLINYFVPCVAILLIFQIFELQPFTVQQHLGDVLILLLLYGWSIIPVMY
LFHYLFSMIATAYTRSTIINILTGTATFLAVTIMNIPELGLRDLANILDGVFLILPNYCL
GQALNDFYQNYQLIAVCTTSPLAEYLCEAFNITYQTNYFSWESPGVGRFIVALAVQGLVF
LTLLFLIEFSIFKMLSNFFHYIIWRKKTASMIDVGAAELIEDSDVRDERLRIEELPFTHL
DSPLVIKELSKIYHRETTFAVNKISLAVNKGECFGLLGFNGAGKTTTFKMLTGDEKVTGG
NAYVNGFSIIKERKMVRQMIGYCPQFDALLGHMTGQETLFMYARLRGIPEHIIKQCVDDM
LQCLLLEPLARKLVRTYSGGNKRKLSTAVAMIGNPAIVFLDEPSTGMDPVSRRLLWDSVT
RFLHNGKSIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLVKIKGD
KPDLKPFKNFIETTFEGSVLKDEHHGMVHYHLTSQDLTWPQIFGTLERAKETYNVKDYSV
NQISLEQVFLSFAQFQFHSEERSD
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggcttcggcagtttggtctgctcctttggaagaactatctgttgcagaaacgc
caggtgttggtaaccatcgttgaaataagcctgccgcttatatttgccgcaattcttata
actctaagataccgagttagttctatgccgtatccaaatgcaaccacatatccctccttt
tttatttatgatattccatatttcccccaacaccctacagttaaatggagtatggtttac
attccctccaacgtgacggcagtggagagaattgcaaagctggtgaagaacagtctgcgg
agggtagttaaacttgtaggtttccaaactgaagctcaatttaataagttcataagatcg
gaaaaccaatcgacagggaatattctggtagctcttgtaatcgaccatgactttaagcac
caagatgaacgtttaccactgcaggttaagtaccacctaaggtttaaatacagtcctctc
aacgcaccccttggggaactaagtacactcaatccaaaccgagatagggactggcacact
cagttccttttcccactcttccaggtacctggccctcgtgagcagtacttcaaagatgga
ggtagtccaggttattaccgtgagggcttcctggcaacacaacttgcaacagacagagcc
attatcaagtatcacgccagcaaagcagcagcaaaactgcttccattgtttccaatagaa
atgctacggttccccttccccccctacattgatgacatctttattttggctatccaaaca
cagctttcactgctggtcatgctgagcttcacctacacggcactgaatgtcaccaaagca
attgtattggaaaaggaaaccaagcaaaaggaatacatgaagatgatgggactcaacaac
tggctgcattggctagcctggttcttcaagttcttaatttttctcataatttcagttagt
ctcatgactgtactgttttgtgtgaagatgtctgaacatggagcagtgctgaacaacagt
gaccccaccctcatatttgtgtttctcctgatgtatgcgatgtccacaatttcattcagc
ttcatgatcagcgtcttcttctcccaagccaatatagctgctgcggttagtgggttcctg
tactttttttcatacatcccctacttcttcatcgcgccacgttatccctcgatgacagcc
acccagaaagtggcatcatgtttgatctcaaacgtcggaatggcactgggatgccagata
attggcatgtttgaagggaaaggtacgggtatccagtggtcaaacatgaactcgccagtc
agtgtggatgacagtttcacaattgctcacgcaatggcaatgctgctatttgattcactt
ggttacaatttggttacctggtacgtggaagctgttttccctggggaatatggaatacca
caggcctggtactttttcatcttgccttcatactggcttggaaagccaagatctgaatac
atcaaagtcaacagagaggatgaggaaacagatagaatcctaaacactgaatacatggag
gatgatccagtgggtattgaagctggcatcagaatcaaagacttgagcaaggtgtttaaa
gttggaaaccagattaagacagcagtctctcatctaaacatgaacttataccaggggcaa
atctcagtactgctggggcacaatggggctggaaaaaccactacattgtccatactcacg
ggtctgttccctcctacaagtggcaatgcctacattaacgggtatgatatctgtcaggac
atgccactggttcgccagagtctgggtctctgtccgcaacatgatgtcctgtttgatgac
ctgaccgtagaagaacatttgtttttttttagtgggctaaaaggatgccagtctggtaag
atccgtgaagaggtaaaccgaatgttaagaattctgaagttcgaggacaaacgaaaagcc
aggatcaagactttgtccggaggaatgaaacgcaagctgtcaattggaattgctctcatt
ggcaactccaaggttgtcatgttggacgaaccaacatctggtatggatccactctctcgg
agagctgcctgggaccttctacagcatcagaagtatggccgcactatcctactaactacc
cattttatggatgaagctgatctccttggagatcgtattctgatcatggccaatggacag
cttcaatgctgtggatcttcactgttcctcaagaacaagtatggggccggataccacatg
gtgatcgtgaaagagcctcattgtaaagtcgttaaaattactgatcttgtgaagagcttt
gtgcccaaagcagtcctgcagaccactgctggtgcagaactctccttcgtccttccgaat
gaaagtactgacagatttgaaacccttttcacagaactggaaaagaagaagaatgtgctg
ggaatagccagttatggagcttcggtcactacaatggaggaggtgtttttgagggtgggg
aagctggtggactccagcattgacctacaggctatcaatttgccagcaatccaataccag
cacgaacgcaggactagcgactggtcaattggggagaaaaccagcctaaatgacctgatg
gactttacagatgatggtgactatcatcccattgaatattcttctgtcaaactgaacact
ggggtcatcctgtatttgcagcagttctacagcatgttcatgaagcgagcaacgtacagc
tggcggaactggaaggtgtttacagcccagtttatggtcccgctgatttttgcctctttt
gcattgattgtcgccaagacatttccaggaccccaggattcacctccgctaaatctgact
ttggaaaagtatggacctactattgttccttatgcagtgagatttaacgccaacatcctg
cctaaagagttggcccagacctacagagatgtgctgcaaaaacagcttggcatcccaagg
cagaccgaggatgatattattaattatctattgaattcttcagttaagaaaggaccatcc
tttcatgaacaatgtgtaatagctgctgatttccatagctcactaacatctggaaccagg
atacgggttttgttcaataacctgggctaccatacttctgctacctctctgatgttagtg
aacaatgccttattcaaaatgctggtggggccagcagcttcaatcagtaccaccaactac
ccacagccgcgcaacattacagagcaagcaatagaccaactgcatgaaaatcggacaggg
tttgctttggccttcaatttgatgtacggcatggcatttctggccagcaccttcaccctg
ttgttggtgtctgagagaaccataaaatccaagcacattcagctcatcagtggccttcat
atcatcaacttctggatgtctgctctcctctgggatctgattaactactttgtcccatgt
gttgcaatcctgctgatattccagatctttgagctgcaacctttcactgtgcagcaacac
cttggagatgtgttaattcttctgctcctttatggctggtctattatccccgtcatgtac
ctcttccactacttattttctatgattgccacagcttacaccaggagcaccataatcaac
atcctgactggcactgccaccttcttggccgtcaccatcatgaacattccagagcttggt
ctgagggatctagcaaatattctggatggagtgtttctcatcttacccaattactgcctg
ggacaagccctgaatgacttttaccagaactaccaattgattgcagtgtgcaccaccagc
ccccttgccgaatatctgtgtgaggcattcaacatcacctaccagactaattacttttcc
tgggaatctcctggagttggccgtttcattgttgccctggcagtccagggcttggtattc
ctgactcttctcttccttattgagttcagtatcttcaaaatgttatccaattttttccat
tatatcatctggagaaagaaaacggcttcaatgatagatgtcggagctgcagagctcatt
gaagattctgatgtgagggatgagcgtttgaggatcgaggagttaccatttacccattta
gacagtccgttggtgataaaggagctctccaagatttatcacagggagacaacgtttgct
gtgaacaaaatttctttagctgtaaataaaggggaatgttttggactgctggggtttaat
ggagctggaaaaacaaccaccttcaaaatgttgactggtgatgagaaggtgacaggggga
aatgcctatgtcaacggtttcagcatcataaaagaaagaaaaatggtgcgtcagatgatc
ggttactgtccccagtttgatgcccttcttggtcacatgacagggcaggaaacactgttt
atgtacgcacgattacggggcattcccgagcatatcattaaacagtgtgtggatgatatg
ctacagtgtcttctacttgaacctctcgcccggaagctggtgcggacgtacagtggtggg
aataagaggaaattgagcaccgcagtggcgatgattggaaatcctgccattgtcttcctg
gatgaaccttccaccggcatggatcccgtttccaggagattattatgggattcagtgacc
agatttctgcacaacgggaagtccattgtcatcacctctcacagtatggaagagtgtgag
gcactctgcaccaggctggctgtgatggtcaatggtcagttcaaatgccttgggagcccc
cagcacctcaagagtaaatttggcagtggatacacgttattggtcaaaatcaagggggac
aaacctgatctcaagcctttcaagaattttattgaaacaacgtttgaaggcagtgtttta
aaagatgagcaccatggaatggtgcattaccacttaaccagccaagacttgacatggcct
cagattttcggcacactagaaagggccaaggagacatacaatgtcaaggattattcagtc
aaccagatctccctcgagcaggtgttcctcagcttcgcgcaattccagtttcattcagag
gaaagatcagattaa
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integrated database retrieval system
