Scyliorhinus torazame (cloudy catshark): 140394531
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Entry
140394531 CDS
T11303
Symbol
vps35l
Name
(RefSeq) LOW QUALITY PROTEIN: VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140394531 (vps35l)
Membrane trafficking [BR:
stoz04131
]
Protein recycling
Others
Retriever complex
140394531 (vps35l)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140394531
NCBI-ProteinID:
XP_072337992
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Position
17:189701675..189860524
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AA seq
975 aa
AA seq
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MAAAIWCPKGRNYGAELECCCPESVPLEFGDFHPLKLITVTESKTKKVVRKGSTSSTSSS
SSSSVVDPLSSMLDGSDPLSQFAALSDPLAPATMTTGKSNANMDPSKKQREEEDTGVGND
FEPWAGKRSYILARYTTTEKLSINLFMGSEKGKATSPGSAVSEKVRTRLEELDDLEEGSQ
KELLNLTQQDYINRIEELNQSLKDAWATDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVL
ITDILDTFGKLVYERILSMCASSRASFPGASVSDNFGPDEVNETAKETCLNWFFKIASIR
ELISRFYVEVAILKCNIFLSKTGISETLPRLTSMIRGIGDPLVAIYARAYLCRVGMEVAP
QLKDNLNKNFFDFLSTFKQIHGETVQNQLAVQRVEIPVYLTLYTPAIDWILQCIAYRAPE
ALVTEMMDRSKKLGNNALLLNSVMSAFRPEFIATRSMDFIGMIKDCEESGFPKHLLFQSL
GLNLILADPPENDRLQILNEAWKVLTKLKISQDYVNCAEVWIEYTCRHFSKREVNTVLSD
IIKHLTPDRAFEDAYPQLQSIVTKVLEQFHDFAILFSMEKFLPFLDMFQKESVKVEVCKS
IMEVFIRQQQELTRDPVILNALMHVCKTMHDSVNALTLDDEKRSLAVLISGFIRMVSFGR
DFEQQLSFYVEARSRFCNLEPVLIQLTHSVNQLAMETRKVMKGNHSRKTAAFVRACAAYC
FITIPSLTSIFARLNLYLHSGQIALANQCLSQADGFFKAAIGLVAEVPKMLSIDGKMRTS
EGFLLEFLNNFFSTLLIVPDPPEQGVLYLVRGLLNVIQDYIWEDHTDSKVRIYINVLHLL
AAASQERYPYHVDKVDSNDNLYGNDPKFLAEINKLSETLIGQILDHLKTLGKDETLKRQS
ALALSLFNSIVTHGDLQNNKLNQLTVNLWNLAQKHGFADTKTMVRTLEHIKRQGKQPNMS
HFAELTLRLPLQSRT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgatctggtgtcccaaagggaggaattatggagcagaattggaatgctgc
tgtcccgagtctgtacctctggaatttggtgacttccaccctctgaaacttatcactgtc
actgaatcaaagactaagaaagtcgttcgtaaaggaagtacctcatcgacatcttcatca
tcttccagttcagtggtggatcctctgagcagcatgttggacggcagtgaccctctgtcc
cagtttgctgcattatccgatcccctggcccccgcaaccatgacaacaggaaaaagcaac
gccaatatggatcccagtaaaaaacagcgtgaagaagaggatacaggagtcgggaatgac
tttgaaccatgggctggaaaacgcagctatatactggcacgatacacaaccacggagaag
ctttctatcaacttgtttatgggatctgagaaaggtaaagccacaagtcctggatctgct
gtctctgaaaaagtgaggactcgtttagaagagttagatgacctggaggagggctctcag
aaagagctgttgaacctgactcaacaggattatataaaccggattgaggaactcaatcag
tcgctgaaggacgcatgggccacagatcaaaaagtcaaagcactgaaaatagttattcag
tgttcaaagctgctgtccgataccagcgtgatccaattttacccaagcaaatttgttttg
atcactgatattttggatacttttggcaaactagtatatgagcggattttgtccatgtgc
gcaagtagtcgagcttcctttcctggagcctctgtgtcagataactttggtccagatgaa
gtgaatgaaacagcaaaggaaacttgtctgaactggttcttcaagattgcctcaatcagg
gagctcatttctagattttacgtggaggtggccatattaaaatgtaacatattcctttct
aaaactggtatctctgagactcttcctcggttgacctctatgatcagaggcattggtgat
ccattggttgctatctatgcaagagcatatctttgcagggttgggatggaagtggcacca
cagttgaaagacaacttgaataagaatttttttgacttcctctccacgtttaaacaaatt
catggcgaaacagttcagaaccagcttgctgtgcagcgggtagaaattccagtgtatctc
acgctgtacactcccgctatagactggattcttcaatgtattgcgtacagagcaccagag
gctttagttacagaaatgatggacaggtccaagaaacttggaaataatgctttgctgttg
aactccgtaatgtcagcattcaggccagaattcattgcaactagatcgatggatttcatt
ggcatgataaaggactgtgaggagtctggctttcccaagcatcttcttttccaatccctg
gggttgaacttgattttggctgaccctcccgagaatgacaggctacagattctcaatgaa
gcctggaaggttcttaccaaactgaagatttcccaggattacgttaactgtgccgaggtt
tggatagaatacacatgcaggcatttctcaaaacgagaagtcaatacggtattatcagat
atcattaagcatttaactccagaccgagcttttgaagacgcttatccacagctacaatcc
attgtaacaaaagtactcgagcagttccatgattttgcgattttattttcaatggagaag
ttcctaccgttcctggatatgttccaaaaagaaagtgtcaaagtagaagtctgcaaatct
attatggaagtttttattaggcaacagcaagaactaacccgtgaccctgtcattcttaat
gctctaatgcacgtttgcaagacgatgcacgactctgtgaatgctttgacattagacgat
gagaaaaggagtttggctgttctaatcagcggatttatcagaatggtttcatttggccgt
gactttgagcagcagctaagcttttatgtggaagccagatccaggttttgcaacttggag
cctgttcttatccagttgacccatagtgtaaatcagctcgccatggaaaccaggaaagtg
atgaaaggcaatcattccagaaagacagcagcatttgtgagggcttgtgctgcatattgc
ttcattaccattccatcgttgaccagtatctttgcacgtcttaatctctatttgcactcc
ggacagattgctctcgcgaaccagtgtctttcacaagctgatggcttctttaaagctgca
atcggcctggttgcagaagtgccgaagatgttaagcatcgatgggaagatgagaacttca
gaagggtttcttctcgagttcctcaataacttcttttccacattgttgattgtgcctgat
cctcccgagcaaggtgtcctgtacttggtgagaggtcttttgaatgtgatccaggactac
atttgggaagatcatacggattccaaagtgcgaatttacattaatgttttacatttgctg
gctgcagcaagtcaagaaagatacccctaccacgtggataaagttgattccaatgataac
ctctacggaaatgaccccaaattcttggctgaaattaataagctttctgaaactctgatt
ggacaaatcttggaccacctcaagacacttggaaaagatgagactttgaagcgacagagt
gcattggctttatctttgtttaacagtattgttacccatggagacctgcagaacaataag
cttaatcagctaacggtaaatttatggaatctcgcccaaaaacatgggtttgctgacacc
aaaaccatggtgagaacattggaacatatcaaacggcaaggtaaacaaccaaacatgagc
cattttgcagagttaacattgaggctcccccttcaatcccggacataa
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