Scyliorhinus torazame (cloudy catshark): 140395300
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Entry
140395300 CDS
T11303
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140395300
03041 Spliceosome [BR:
stoz03041
]
140395300
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
140395300
Spliceosome [BR:
stoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140395300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140395300
NCBI-ProteinID:
XP_072338998
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Position
18:complement(73428579..73469158)
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AA seq
574 aa
AA seq
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MDGIVQDITVGTKRGSDELLSACATNGPFIMSNSAPSAGEYTNGNDSKKFKGENRSSGIL
PSRVIHIRKLPNDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNSEEAANTMVSYYST
VTPYLRNHPIYIQYSNHKELKTDNSPNQARAQAALQAVNAVQTANMAIAGTGVSDSAGGL
AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVMKIITFTKNNQFQALLQYADGSSAQHA
KLALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPTLDQTMAAAF
GKEASLLGAPGIISSPYGGGTGFPPSIAFQQADFLQHPSDFCLSVPGVHGALAPLGMPSA
AAAAAASRIGIPGFASAANAVLLISNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENA
LVQMFDCTQAQLAMSHLNGQRLHGKAMRVTMSKHQTVQLPREGQEDQGLTKDYSSSPLHR
FKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKLLFSSTTGMVKAFKFFQKDRKMALIQ
MSSVEEAIQALIDLHNHSLGENHHLRVSFSKSTI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcgggggtctgacgagcttcta
tctgcttgtgctaccaacggtccctttatcatgagcaactctgctccctctgctggtgaa
tacaccaatggcaacgacagcaaaaagttcaaaggcgagaacaggagttcaggaatatta
ccttccagagtcattcatatccgcaaacttcccaacgacgtcactgaggcagaggtcatt
tccttgggtttgccttttggcaaagtaaccaatcttctcatgttaaaaggcaaaaaccag
gcttttatagaaatgaactctgaagaagctgctaacacgatggtgagctactacagcact
gtcactccatacctaagaaaccatcctatctacattcaatattcaaaccacaaggagctg
aaaactgacaactctcccaatcaggctagagcacaagcagctcttcaggcagtaaatgct
gtgcagactgcaaacatggctatagctggcactggtgtctcagacagtgcaggtggcctt
gctggccagagccctgttcttcgcattattgtggaaaaccttttctatcctgttacactt
gatgtattgcaccagattttttccaagtttggcactgtaatgaaaatcatcactttcaca
aagaataaccagttccaggcgttgctccaatatgctgatggctccagtgcacaacatgca
aaactggctctggatggacagaacatctataatgcctgctgcactctgcgtattgacttc
tccaaattgactagccttaatgttaaatacaataatgacaaaagcagagactacacacgt
cctgatctaccatctggtgacaaccagccaaccttagaccaaaccatggcagccgctttt
ggtaaggaagcctccctactaggtgcaccaggtatcatctcctcgccttacggaggagga
actggtttccctcctagtattgccttccagcaagctgacttcctccaacatccatcagat
ttctgtttgtccgtcccaggggttcatggggccttggctccactcggcatgccgtcagca
gcagctgcagcagcagccagtcgtattggcattccgggatttgcctctgcagccaacgct
gtcctgttgattagcaatctgaatcctgagagagttacgccccaatgcctctttattctt
ttcggagtgtatggtgatgtgcagcgtgtgaagatacttttcaacaagaaagaaaatgcc
ttggtacaaatgtttgattgtacccaagctcaactggctatgagccatctgaatggtcag
aggcttcatgggaaggcaatgcgtgtgaccatgtccaagcaccagacagtgcagttgcca
cgtgagggccaggaggaccagggcctgaccaaggattatagtagctcgcctctgcatcgc
ttcaagaaacctgggtcgaaaaacttccagaacatctttcctccttctgccacccttcat
ctctccaatattccaccttctattactgaagaagatctgaaattactgttctcgagcaca
actggcatggtcaaagcattcaaattctttcagaaggatcgcaaaatggctctcatccag
atgagctcagtggaagaagcaatccaagctctcattgaccttcataatcatagccttgga
gaaaaccatcacctcagggtttccttctctaaatcaaccatttaa
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