Scyliorhinus torazame (cloudy catshark): 140396248
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Entry
140396248 CDS
T11303
Symbol
wnt5b
Name
(RefSeq) protein Wnt-5b isoform X1
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04150
mTOR signaling pathway
stoz04310
Wnt signaling pathway
stoz04519
Cadherin signaling
stoz04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140396248 (wnt5b)
04150 mTOR signaling pathway
140396248 (wnt5b)
09133 Signaling molecules and interaction
04519 Cadherin signaling
140396248 (wnt5b)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
140396248 (wnt5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stoz00536
]
140396248 (wnt5b)
Glycosaminoglycan binding proteins [BR:
stoz00536
]
Heparan sulfate / Heparin
Morphogens
140396248 (wnt5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
140396248
NCBI-ProteinID:
XP_072340697
LinkDB
All DBs
Position
19:79966273..80152273
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AA seq
403 aa
AA seq
DB search
MQILFLRLPRKIGTFSKPFNQRTVARRLLAQGALRAGLSPARLTMTGLRVLLAAALLSSC
SQCLVEGNSWWSLAMNPIQRPEMYIIGAQPLCSQLNGLSQGQRKLCQLYQDHMVYIGEGA
KTGIKECQYQFRQRRWNCSTVDNISVFGRVMQIGSRETAFTYSISAAGVVNAISRACREG
ELSTCGCSRAARPKDLPRDWLWGGCGDNAEYGYRFAKEFVDAREREKNYPKGSEDHARTL
MNLQNNEAGRRAVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDLLKEKYDSAAAMK
INRKGKLELVNSRFNPPTADDLVYLDQSPDYCVKNKTTGSLGTMGRLCNKTSEGMDGCEL
MCCGRGYDQFKTVQVERCHCKFHWCCYVKCKKCTQIVDQFVCK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcctttttcttcggctgccacgaaaaatcggaacattctcgaagccctttaat
cagaggacggtggcaagacggttgctggcgcagggagcgcttcgtgcaggtttgagcccg
gccaggctcaccatgactgggcttcgcgtcctgttggctgccgctttgctctccagctgt
tcccagtgcttggtcgagggaaactcttggtggtcgctggctatgaaccccatccaacgg
cctgagatgtatattatcggagcccagcctctctgcagtcaactgaacggcttgtcacag
ggccagcggaaattgtgccagttgtaccaggatcatatggtttatattggagagggggcg
aagactggcattaaggaatgccagtaccagttcagacagaggcggtggaactgcagcact
gtggataacatctctgtgtttggaagggtcatgcagatagggagccgggagactgccttc
acatattctatttcagcagctggcgtagtaaatgcaataagtcgtgcgtgtcgtgaaggg
gaactctcaacctgtggctgcagtcgtgctgccaggcccaaagaccttccccgggactgg
ctgtggggaggctgtggggacaatgcagaatatggctatcggtttgccaaagaatttgtg
gatgctagggagagagagaaaaattaccccaaagggtcagaagatcatgccaggacacta
atgaatctgcagaacaatgaagctggcagaagggctgtgtacaatctggcagatgtggcg
tgcaagtgccatggtgtttctggctcctgcagcttgaagacatgttggcttcaactagct
gatttccggaaggtgggtgacctgctgaaagaaaagtatgacagtgccgccgccatgaaa
atcaaccgcaaagggaagctagagctagtaaacagccgcttcaaccctcccactgcagat
gacctagtttatcttgaccagagccctgattactgtgtgaagaataagaccacaggctcc
cttggcacaatgggccgactctgtaacaagacctctgagggaatggatggctgtgagcta
atgtgctgtggacggggttatgatcaattcaagactgtgcaagttgaaaggtgccattgt
aaattccattggtgctgttacgtcaaatgcaaaaaatgcacacaaatagttgaccagttt
gtttgcaaataa
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