Scyliorhinus torazame (cloudy catshark): 140396533
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Entry
140396533 CDS
T11303
Name
(RefSeq) protein PALS1-like
KO
K06091
MAGUK p55 subfamily member 5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04519
Cadherin signaling
stoz04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
140396533
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140396533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
140396533
Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
PDZ domain-containing proteins
MAGUK family proteins
140396533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
140396533
NCBI-ProteinID:
XP_072341354
LinkDB
All DBs
Position
2:complement(236228995..236410302)
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AA seq
671 aa
AA seq
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MTTSHMNGHVAEGSDNEAKNIDLSSHDEPPRHREMAVDCPDDLGSRTMPIRRSAQLERIR
QQQDDMRRRREEEGKKQEFDLNSSIRLKKLAQVQPKAGIDNPTFEDILEGPSNTIKVLEL
DELLSSLKHIQHSLVDTQSQDDVALILQLVQNQDFQNAFSIHNTVAIHMHKMSPPYPVNA
SAQELSQEVQKILTISHQKDGQELGALLASPHFEALLRAHDGVAQQEMLLEPTTEEHAYE
RVAEYGGETVKIVRIEKARDIPLGATVRNDVESVIISRIVKGGAAEKSGVLHEGDEVLEI
NGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQTKNSPAKEMVVHVKAHFDYDPSDDPYI
PCRELGLSFQKGDVLHVISQEDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIE
EDKEPEKSGKLWCAKKNKKKRKKVLYNANRNDDYDNDEILTYEEMSLYHQPASRKRPIVL
IGPPNCGQNELRQKLMEREADRFAPAVPHTTRSMRDNEVNGRDYLFVSRQFFEADMASNK
FIEHGEYEKNLYGTSIDSVRQVINSAKICLLNLHTQSLRILRNSDLKPYIIFIAPPSQER
LRAMLTKEGKNPKPEDLRDIIEKAREMEQNYGHYFDAAVVNTDLEKAYQELIRLINKLDT
EPQWVPSTWLR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcacacatgaatggacatgttgcagaggggtctgataatgaggccaagaac
attgacctttcatctcacgatgagccaccaagacaccgagaaatggcagtggattgtcct
gatgacttgggttcacgaaccatgcctattcgtcgaagcgcacaattagagagaattcgg
cagcaacaggatgatatgcgtcgtagacgagaagaagagggaaagaagcaggagtttgac
cttaattcttccattcgactgaagaagcttgcgcaggttcagccaaaggcgggcattgat
aaccctacatttgaagacattttagaaggacccagcaacacaattaaagttctagaatta
gatgagctgctgtcttctctaaaacatatacagcacagcctggttgacactcagagtcag
gatgatgtggcactcattttgcagctggttcagaaccaggatttccaaaatgctttcagc
attcacaatacagtagccattcatatgcacaagatgagtccaccataccctgtgaatgcc
agtgcacaggagctatcccaggaggtgcagaagattttgaccattagccaccagaaggat
ggacaggaactcggtgctctacttgcttcaccacactttgaagcactgcttcgagcccat
gatggagtggcacagcaagaaatgctgttagaaccaacaactgaagaacatgcatatgag
agagtagcagaatatggaggagagactgtgaaaattgttcgcattgaaaaagcacgtgat
atcccccttggcgctacagtgcgcaatgatgtggaatctgtcattattagtcgtattgtg
aagggtggtgctgcagagaagagtggtgtattgcatgaaggagatgaagtccttgaaata
aatgggattgagattcgtggaaaagatgtcaatgaggtgtttgatttgctggctgacatg
catggtacactgacatttgtgctgattcccagtcagcagaccaagaattctcctgccaag
gagatggtggtacacgtgaaagcccattttgattacgacccttcagatgatccttatatc
ccctgtcgcgaactggggctgtctttccaaaaaggagatgtacttcatgtaataagccaa
gaagacccaaactggtggcaagcttacagagatggagatgaagacaaccagccattagct
gggcttgttccagggaaaagcttccagcaacaaagagaagccatgaaacaaaccattgag
gaggacaaggaaccagagaaatcaggtaaactttggtgtgctaagaaaaataagaagaag
cggaagaaagtgctatacaacgcaaatagaaacgatgactatgacaatgatgagatcttg
acgtatgaagaaatgtcgctgtatcaccaacctgcaagcagaaaacggccaattgttcta
attggcccaccgaactgcggtcagaatgaattacggcagaaactgatggaaagagaggct
gatcgttttgccccagcagtacctcatacaacacgatccatgagagataacgaagtgaat
gggcgtgattacctctttgtgtcacgccaatttttcgaagccgacatggcaagcaacaag
ttcattgaacatggcgaatatgaaaagaatctatatggcaccagtatcgattcagtgcgg
caggtgatcaactctgcaaagatatgcctgttaaatttgcacacccagtcattgaggatt
ctgcgcaattcagatttaaaaccttatataatcttcattgcaccaccttcccaggagaga
ctgcgtgcaatgctgaccaaagaggggaaaaatccgaagcctgaagatctgcgagatatc
atagaaaaggccagggaaatggagcaaaactatggtcactattttgatgcagctgttgtt
aatacagacttggaaaaagcataccaggagttaatccgcctcataaacaagcttgacaca
gagcctcagtgggttccatccacgtggctgcggtga
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