Scyliorhinus torazame (cloudy catshark): 140398425
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Entry
140398425 CDS
T11303
Symbol
spop
Name
(RefSeq) speckle-type POZ protein isoform X1
KO
K10523
speckle-type POZ protein
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
140398425 (spop)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140398425 (spop)
Ubiquitin system [BR:
stoz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
140398425 (spop)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
140398425
NCBI-ProteinID:
XP_072343199
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Position
21:complement(96292039..96439965)
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AA seq
413 aa
AA seq
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MRDACLTREVPAQRRRREVAGGWGMVARPAAKPRESAWFYLNIAVTFPTASHCVEVRKYG
DKSGKIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK
DYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDF
LLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTD
CCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG
KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQA
VDFINYHASDVMETSGWKSMVLSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacgcttgtttaactcgtgaggtcccggctcagaggcggcggcgagaggtcgct
ggggggtgggggatggtggcaaggcccgcagcaaagccgcgagagtctgcatggttctat
ctgaatattgcagtgacgtttcccacagcaagccattgtgttgaagtacgcaaatacggt
gataaatcaggaaagataaaagtagtgaagttctcctatatgtggactattaacaacttc
agtttctgccgagaagaaatgggagaagttatcaagagctcaactttctcatccggagca
aatgataaattaaagtggtgcctccgagtgaaccctaagggtttagatgaggaaagtaaa
gattacctatcactctacctgctgctagtcagctgtccaaaaagtgaagtcagagcaaaa
tttaaattctccattctgaacgcaaaaggtgaagaaactaaggcaatggagagccagcga
gcttatcggtttgtacaaggaaaggactggggtttcaagaaatttattagaagagatttc
ctactagatgaagccaatgggctccttcctgatgacaaacttacattattctgtgaagtt
agcgtggtccaggattcagtgaatatatcaggccagaacaccatgaatatggtaaaagtt
cctgaatgtcggttagcagatgaacttggaggattgtgggagaattctagatttacagat
tgttgcctttgtgtagctggccaagagtttcaagcacataaagcaattctcgcagctcgt
tccccagtcttcagtgctatgtttgagcatgaaatggaagaaagcaagaagaatcgagtg
gaaattaatgatgtagagccggaagtatttaaggagatgatgtgttttatttatacgggg
aaggcacccaatcttgacaaaatggcagatgacttacttgcagctgctgataagtatgct
ctggagcgcttgaaggtgatgtgtgaggatgctctttgcagcaatttgtctgtagaaaat
gcagcagaaattttaattctggcagatctacacagtgcagatcaactcaaaactcaagca
gtagacttcataaactaccatgcgtctgacgtaatggaaacatctggctggaaatctatg
gttttgtcccaccctcatctggtggctgaagcttaccggtcactagcatcagctcaatgc
ccttttcttggtcctccccgcaaacgactcaagcaatcctaa
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