Scyliorhinus torazame (cloudy catshark): 140398505
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Entry
140398505 CDS
T11303
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_assoc
zf-C3HC4
zf-C3HC4_4
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
PTCB-BRCT
zf-ANAPC11
zf-RING_5
zf-RING_10
zf-RING_6
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
140398505
NCBI-ProteinID:
XP_072343365
LinkDB
All DBs
Position
21:112089349..112185779
Genome browser
AA seq
1952 aa
AA seq
DB search
MSLCKSEIERVHKVLSLMLKNLECPICLELMKEPISTKCDHQFCRFCILKLFDEKKSTIQ
CPLCNNTFSKRSLQESTRFKQLAEGIMKVIQAFELDTGYEFSIGNTPKRTPTEINAYRQL
WQNDSHAWSNTPQNVMATGISKNRTLKVCSDPPLTEFVKRISSRNKRQKIESTSVYVGID
SDSSEEPLFKTHVNVKSALHQKPVNKQATSQKEKIGRCDNDEKPCEGKKSKLSKPVLEEL
FSSEMDDNEVSEDTANADAGDYSCATESETEQKQMIENISESNFCSPEPPGKVVANESFS
QVAAEWVNKQNCIDGNQRFADRAATPLSEKSALEKVVDQLANHEELNQEDPTWIVENETD
FQRSASQSVPKVSKRKSQRIIKKVSEWLSKINVEEVAALGIESNPHDQNTESDSLAESPV
FGDEASSSEETEKVKDDLVSPLKEKSVVKITATDVKNKVFGKTYKRDKRKSAPVNWSFNS
DNKSDDLSTRREDAFDVRCNKTQKGNRKGIGLDPEDFIKRTVNEEDTFDSNVQNGEKPID
PEENVPVADNIESETNKEIPGEPSDIKQIVVTALTTVAVCCDAMEESEQIVQQPDLELCK
TDAEMRKKMNKALGKKGKKSSIKQTRKRTKPLQLVNQLARADASPRSNPVDMNENKIDSF
PSSEEPVKAELEMRATRRSSRLKLLDEKLILQDENQGKKSKLTRIHTLLPTGADIEPLAE
PHKENTDARMICGETESLPTQDIIAEACNEQFPKNSCSKQDDAASHGSRGNSVVEKPEGS
DVPGLSKNMHQQLRDCDKAKTEDDPLHVECPMWHDHSSVTVASCSHSEDSGSKISLLLLR
PVPGEKRSDPKVHSGCTGEDEVNPNGATSLAECNSRVETINSEESSSAGVSIKHQTRSKE
VNDDSEVDTQLLLKSFKMSKRRSFILMPGPERLAVEDECATAPVSKCIDAVASCKSEKIN
TGDAGNRSYDGNVAADQEMGKMNLDKAGCPIKNPEIANGNVKSKLCTSELNSGLQLFSRE
DHDSAEIVPPTASTDGSPLPLVFPQHIQEVVPLSSSRSKGKRNTSLPRRKRSNSSSSLAN
TEKGIFDSDGSSQATASGHLNNNTNNNSCLKKNPNTAKGRALEITISKEIQQGGLRTRLG
SNAHPESELLFSTRDPLGQEAIEKDSYQERKSDNLLKEREFDKNSELLQNIPMAVESSTE
SELVKLTNVAQYHSPPNAQESITVGNKTSESKCPLNSQVSSVTPEGLLDSAEGSLNKSRD
EMQNKWEMGEGKEQLKQHAAAIEKLKSSSPKSSTPDQVRRPRKRPVKLSTSESETSDDEL
PCFQIFGFNRLGSNAASVSQSSLSAVHLSSKGSLVHPFSLPNSNTAVKKTFYAEVNKLEE
NVKGEGSPTNECLSPSQESGESPDLFSSHSDGSSPDASPQPKASRKTLKQINATSVTESP
NQDEINDGKVEETWEAPYLQPRCLDGVKVPGNDSEASRAGNSSPESDILTTQQRYAIQNN
IKKLEHEMAELVAVLEEHGSQDTEHLLSIKHPEDCTEFLENQERTVTAEFPLGQTENLQR
RSKSKFLPAAEAARPQPLLNTSVIFARGDKEETEYPLSQIPERPQAVNGSLNQFQSKEGS
QEEMTDSQNAVPKKEEIKEHINSDSEGEELLKDIITSAQKLESTGKKDCVLASASSPSIL
TPMIRCQPTEDVADDASMSPPQHDRRAMSKCIKKSRSSLTSSPVFNKSLNASKSTVVTIQ
RKMSFVASGLNKNEILLVETFARKTGATFLNNFSPSTTHVIMKTDADLVCERTLKYFMGI
AGRRWVVSYQWIIECFRKCMVIDEVMFEVQGDVINGRSHNGPRKARKTTDEKLLLRHYEI
CCFGSFTGMSRDQLEWMVELCGASIIKEPYLFTYSSNRTAVVVVQSDANSANTDYEAIQR
QYNTVVSREWILDSVACYENHQLEAYMVCDPH
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtgcaagtcagagattgaacgtgtgcacaaagttctctcgctaatgctgaag
aatttagaatgtccaatatgcttagaattgatgaaagaaccaatctcaacaaaatgcgat
catcaattctgtcggttctgtatattgaagctttttgatgagaagaaaagtactatacag
tgtccattgtgtaataacacatttagcaagaggagtctgcaggaaagcactcgttttaaa
caacttgcagaaggaattatgaaagtcatccaggcctttgaattggacacaggttatgag
ttctccataggcaacacgccaaaacggacaccaactgagatcaatgcttacagacagtta
tggcaaaatgatagccatgcttggagtaatacaccacagaatgtcatggctactggaatc
tccaagaatcgcactttgaaggtgtgctctgaccctcctttgactgaatttgtaaaaagg
atctcctcaagaaataaaaggcagaaaatagagagcacttcagtctatgttgggattgat
tcggactcttctgaggagcctttgttcaaaacacatgttaatgtaaagtctgcactacat
caaaaacccgtgaataagcaagctacttctcaaaaagagaaaattggtcgatgtgacaat
gatgagaaaccttgtgagggaaagaaatcaaaattatctaagccagtattggaggaactg
ttttcatcagaaatggatgataatgaagtgtcagaagatactgcaaacgcggatgctggt
gattattcctgtgcaacagaatctgaaacagaacaaaaacaaatgatcgagaacatatct
gaaagtaacttctgtagcccagagccacctggcaaggtcgttgcaaatgagagcttttcg
caagttgcggcagaatgggtgaataagcaaaattgcattgatggaaaccaacgttttgct
gaccgtgcagcaacgcctctttcagaaaaaagtgctttagaaaaagttgtggatcagttg
gctaaccatgaagagctaaaccaggaagatcctacttggattgttgaaaatgaaactgat
tttcagagaagtgcaagccaatcagttcccaaagtgtccaaacgaaaaagccagcgaatt
atcaagaaagtcagtgaatggttatccaaaattaatgttgaagaggtggcagctcttggc
attgaatctaatccacatgaccagaatacagagtcagattccttggcagagagtcctgtc
tttggtgatgaagcttctagttcggaagaaactgaaaaagttaaagatgacctcgtatcg
cctttaaaagaaaaaagtgtggtgaaaataactgcaactgatgttaaaaacaaagtcttt
gggaaaacctacaagagagacaagagaaaaagtgctccagtgaactggagttttaattct
gacaacaaaagtgatgacttgagtactcgaagagaagatgcctttgatgtccgttgcaat
aaaactcaaaaaggaaatagaaaaggcattggactggatcctgaggacttcataaagcgg
actgttaatgaagaagatacctttgacagtaatgttcagaatggagaaaaaccaatagac
cccgaggagaatgttcctgtagctgataacattgaatcggagacaaataaagaaatacca
ggtgagccatccgatattaaacaaattgttgttactgctctgactacggtcgcagtttgt
tgtgacgcgatggaagagtctgagcaaattgtgcagcagccagacttggagttatgcaag
actgatgctgaaatgaggaaaaaaatgaacaaagctttggggaaaaaagggaaaaaatca
tcaataaaacagactagaaaaagaactaaacctttgcagctggtcaatcagcttgcaaga
gctgatgcaagtcctagaagcaacccagttgacatgaatgagaataagattgatagcttc
cccagtagtgaagaaccagtgaaggctgaactagaaatgagggctaccagacgaagcagc
agattgaagttgctggacgaaaagttgatcctgcaggacgaaaaccaagggaagaaatct
aaattgaccaggatacatacactcctcccaaccggtgcagacattgaacctttggcagag
cctcacaaggaaaatactgatgcacgaatgatatgtggggaaactgagagtctaccaacg
caggatattatagctgaagcctgtaacgaacagtttcctaaaaatagctgttcaaagcaa
gacgatgctgcttctcatggatcacgtgggaactctgtggtagagaaacctgaaggcagt
gatgtgccaggattatcaaagaatatgcatcaacaattaagggactgcgataaagcaaaa
actgaggatgatcccttacatgttgaatgcccaatgtggcacgatcattcttctgtcaca
gtagcatcttgctcacactcggaggattcaggttcaaaaatcagcttgttactacttcgg
cctgttcctggagaaaaacgtagtgacccaaaagtgcattccggttgtacaggtgaagat
gaagtgaacccaaatggtgcaacatctttggcagagtgtaattccagagtcgaaacaata
aatagtgaagagagtagcagtgcgggcgtatctatcaaacaccagacaagatcaaaggag
gtaaatgatgacagtgaggtggacactcagctccttctaaagtcgttcaaaatgtctaaa
cgaagatcattcattcttatgccaggaccagagcgtctggctgtagaagatgaatgtgca
accgctccggtctctaaatgtattgatgctgtggccagttgtaaatcagagaaaatcaat
acaggagatgccgggaacagaagttacgatggaaatgttgctgcagatcaggaaatggga
aaaatgaatttggataaagctggttgtccgatcaaaaaccctgagattgccaatggcaat
gttaaaagtaaactctgcacttctgagttgaatagtggactgcagctgtttagcagggaa
gatcatgattctgctgaaattgtacctccaacagcctcaaccgacggatcgcctcttcct
cttgtatttccacaacatatccaggaggtggtgcctctgtcaagtagcaggtcaaaggga
aaaaggaacactagcttgccgagaagaaaaagatcaaatagcagtagttcactggctaat
acagagaaaggaatatttgattctgatggatcaagtcaagccacagccagtgggcactta
aataacaatacaaacaacaattcttgtcttaaaaaaaaccccaacactgccaagggcaga
gccttagaaataactatcagcaaagagattcagcaaggtggtttaagaacaagacttggt
tccaatgcccatccagagtcagaattgttgttttcaactagagatccgcttggccaggaa
gcaattgaaaaagatagttatcaagaaaggaaatccgataacttgttaaaagagagagag
tttgataaaaatagtgaattacttcaaaatattcctatggctgtagaaagctccacagaa
agtgaattagttaaattaactaatgttgcacaataccactctccgcctaatgcgcaagaa
agtattactgtaggaaataaaactagtgagagcaaatgtccactgaattcacaggtgtct
tccgtaacacctgaagggctgctggacagtgctgaaggaagcctaaataaaagtagagat
gaaatgcaaaataaatgggagatgggagagggcaaagaacaactgaaacaacatgcagca
gcgatagagaaactgaagagcagctctccgaaatcttcgacaccagaccaggttcgacgt
ccgaggaagcgaccagttaaactgtctacttcagaatctgaaacaagtgatgatgagcta
ccttgttttcagatttttggattcaataggttggggtcaaatgctgcgtctgtgtcacaa
agttccttaagtgcagtgcacctgtcttcaaaaggctcactcgtacatcccttttcgttg
ccaaacagcaacacagcagttaaaaagacattttatgctgaagtaaataaattggaagaa
aatgtaaaaggcgagggctctccaacaaatgaatgcctttccccaagccaagaatctggg
gaatcccctgacttgttctcttctcattccgatggttcgtcccctgatgccagtccccaa
ccaaaagcaagccgtaagactctcaaacaaataaatgctacaagtgtaactgaatcaccg
aatcaggatgaaataaatgacggaaaagttgaagaaacttgggaagctccatatctgcag
ccacggtgtttagacggtgtgaaagtacctggcaatgacagtgaggccagccgtgcaggg
aactcctctccagagagtgacattctaaccacacagcaaaggtatgcaatacagaataac
ataaagaaactcgaacatgaaatggctgagctcgtggcagtactggaagaacatggaagc
caagacactgaacacttgctctcaataaagcacccagaagactgtacagagtttcttgaa
aatcaagagagaacagttactgctgaatttcccctggggcagactgaaaatttgcaacgc
agatcgaaatcaaaatttcttccagcagctgaggctgcaagacctcaaccactgctaaat
acaagcgtaatctttgcacgtggggacaaagaggagaccgaatacccactatctcaaata
ccagaaaggccccaagcagtgaatggctcgctaaaccaattccaatccaaagaaggttct
caagaagaaatgactgattcgcaaaatgcagtgccaaagaaagaggagataaaggagcac
ataaactcagacagtgaaggtgaggaactgctgaaagacattattacgtcggcacagaaa
ttagaaagtacaggaaagaaagactgtgttttggcatcagcaagtagcccttccattttg
actcccatgataagatgccagcctacagaggatgttgctgacgatgcaagtatgtcacca
ccccaacatgacagaagggcaatgtccaaatgcatcaagaaaagcagatcttcactaact
tcgtctcctgtttttaacaaaagtttgaatgccagcaagagcacggttgtgaccattcaa
agaaaaatgtcctttgtagcttcggggctgaacaaaaatgaaattttgctggttgaaaca
tttgcaagaaaaacaggagccacgttcctcaataatttctctcccagcacgacccatgtc
atcatgaaaacagatgcagatctagtttgtgagaggactctgaagtacttcatgggaata
gcagggaggagatgggttgtcagttatcaatggatcattgagtgtttcagaaaatgcatg
gtaattgatgaggtcatgtttgaggtgcagggtgatgtaatcaatggaagaagccataac
ggcccaagaaaagcaagaaaaacaacggatgaaaaactgctgttaagacattatgagatt
tgctgctttggttcttttacaggaatgagtagagatcagctagagtggatggtagaactc
tgcggtgcttccataattaaggaaccttatttattcacctatagttctaatcgtactgca
gtggttgttgtgcagtccgatgctaattcagcaaatactgactatgaagcaatccagaga
caatacaacactgtcgttagcagagaatggatattggacagtgttgcttgctatgagaat
catcaactggaagcttatatggtctgcgatccacattga
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integrated database retrieval system
