Scyliorhinus torazame (cloudy catshark): 140398526
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Entry
140398526 CDS
T11303
Symbol
vps25
Name
(RefSeq) vacuolar protein-sorting-associated protein 25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140398526 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140398526 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stoz04147
]
140398526 (vps25)
Membrane trafficking [BR:
stoz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
140398526 (vps25)
Exosome [BR:
stoz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140398526 (vps25)
Exosomal proteins of colorectal cancer cells
140398526 (vps25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
DUF2555
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
140398526
NCBI-ProteinID:
XP_072343402
LinkDB
All DBs
Position
21:complement(113466139..113482298)
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AA seq
174 aa
AA seq
DB search
MSFEWPWQYNFPPFYSLQPNANTQHKQLAAWCSLVLSYLRHHKLYTIDVLEAQESPLFHN
KKIQRKFPIEAIQVVLEELRKKGNLEWIDKSKTRCLIMWRRPEEWGKLVYQWVSKNAMTN
SVFTFYELSNGDDTEGEEFHGLEEWLLLRALQFLQSERKAEIITLSDSKGVKFF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgagtggccctggcaatataacttccctcctttctacagtctgcagccaaat
gctaacactcagcacaagcagctggcagcatggtgctcactggtgctctcctacctgcgt
catcataagctttatactattgatgtgttggaagctcaagaaagcccactcttccacaat
aagaagatccagcgcaagtttcccatagaagctatccaagttgtattagaagaactccgg
aaaaaaggcaacttagagtggattgataaaagtaaaactcgttgtctcataatgtggagg
cgaccagaagagtgggggaagcttgtgtatcagtgggtttcaaagaatgccatgacaaac
tctgtttttacattttatgaactctccaatggagatgacactgagggtgaagagttccat
ggtttggaggagtggcttctgctacgggcacttcagtttttacaatctgagcgaaaggca
gagatcatcaccctcagtgacagcaaaggggtcaagttcttctga
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