Scyliorhinus torazame (cloudy catshark): 140399174
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Entry
140399174 CDS
T11303
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140399174 (gapvd1)
Membrane trafficking [BR:
stoz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
140399174 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
EF-hand_14
Motif
Other DBs
NCBI-GeneID:
140399174
NCBI-ProteinID:
XP_072344566
LinkDB
All DBs
Position
22:83219855..83394103
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AA seq
1502 aa
AA seq
DB search
MVKPDLHTLAHHLKQERLYVNSEKQLLQRLNADVLKTAEKLHCSAWIAKQQRINLDRLIL
TSVEASPAECCKHAKILESTQFVDGYKQLGFQETIYGEFLNRLRENPRLVASCLVAGEKL
NHESTHNVILTVFTALYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRKGACTFSI
LFKLFSEGLYSAKLFLTATLHEPIMLLLVEDEDHLETDPNKLIERFTPAQQEKLFGEKGT
EQFRRKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCMEGLAVG
EVKAMCTDLLLAYFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMTGSEEAD
PRLKNSLSKFDKSCVAAFLDVIIGGRTVETPPMSSVNLLEGLSRTVVYMTLNQLVSLITF
ARHVRSGELLRDEDKMALENLIINVPQTRTGKSNSLELTPSSTPQLSPASTPANKKNRLQ
IGQQLAAITAWDTSATNLTAHIPLVTPFAGRNRNRTNEAKDQHFEHESSTQEPVQEVQPE
EVLVISLGITSQMSPGMMSENEVLSMQLAESGQGEVPVEDGKLHGKPDKTLRFSLCSDNL
EGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRK
FEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQDIAGAAAESMLGSLLGLP
GSTSVLLDPCTGSTISETTSEAWSVEVLPSDSEATDLKQEERLQELESCSGLGSTSDDTD
VREVSSRPSTPGLSVVSGFLHYLTGISVTSEDIPNKVEDIRSECSSDFGGKDSVTSPDVE
EIVQGAHQMTSSLPHTDTLLAMFDPLSSDASIIPSIVRPKVHYARPSHPPPDPPILEGAI
GGSDARLPAFGSHICCQTEAELLKQRHSFPERLVRSRSSDIVSSSRRPMSDPGWNAPGSR
RMANEELYAAGAAPVGASGPTSSPSKDSLGEDRKDSDDEKSDRSKSWWKKRFVSAIPKAP
ISFRKKDKQEKDKEDGAQERFQAMQGWLILPYITNDEPIPKLNAQAQAAEDILDKYRSAI
KRASPSEAVGNDEVTEAIGDDSMHDSPRDETLQNLSADDLPDSASQTAQNQDSTFSFRDA
KKKLRMALCSADSIAFPLVSHSATRNGPPGGPDQGELEDNEIVCFLKVQLAEAINLQDKH
LMAQIQETMRCVGRFDSRTCHKLLAAIAEDYRNRAPYIAYLTRCRQGLQTTQAHLERLLQ
RVLRDKEVANRYFTTVCVRLLLESREKHILEFIKDFQNLTAADDKTALVEEFLQSLYGAM
AQDVIWQNASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLFYEHIQRLCKVVS
ANHRALQIPEVYLKEAPWPSAQSEVRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSV
PGADDFVPVLVFVLIKANPPCLLSTVQYINNFYASRLGGEESYWWMQFTAAVEFIKTIDD
RK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcctgatcttcacactctggcccatcatctcaagcaagaacgtctttatgtg
aactctgaaaagcaattgcttcagcggttaaatgcagatgtactgaaaactgctgaaaag
ctgcactgctcagcatggattgcaaaacagcagcgaattaacttggaccgtcttatatta
acaagtgtggaagcttctcccgcagaatgttgcaaacatgccaagatcttggagagtaca
caatttgtggatggatacaagcagctggggtttcaagagacaatatatggtgaatttctg
aatcggcttcgagaaaacccaagacttgttgcctcatgtttggttgctggggagaagctt
aatcatgagagtacgcataatgtcatcctcacagtatttactgccctttatggtaactgc
attatgcaggaagatgagagctatcttctgcaagtgttacgttacctaattgagtttgaa
ctgaaagagagtgataaccctaggcgcctgcttcgaaaaggtgcttgtactttcagcatt
ttgttcaaacttttttcagaggggttgtattctgcaaagctctttctgacagcaacttta
catgaaccaattatgctgctgcttgtagaagatgaagatcacttggaaactgaccctaac
aagcttattgaaaggtttacaccggcacagcaagaaaaactttttggggaaaagggcaca
gagcagttcagacggaaagtgcaggagatggtagagagcaatgaagcaaagctcgtagct
ctggtcaacaaatttattggatatctcaaacaaaatacatattgctttccgcatagttta
cgttggattgtatcgcaaatgtataaaaccttgtcttgtatggaaggattggctgttggg
gaggtgaaagccatgtgcacggatctgttgcttgcttactttatttgcccagcaattgtc
aatccggaacagtatgggataatctctgatgctccaataaatgaagtggcaagatttaac
ttgatgcaggttggccaactcttgcagcagttggcaatgacgggcagcgaggaagcagat
ccgcgattgaagaatagtctttccaaatttgacaaaagttgtgttgcagctttcttggat
gttatcattggaggccgtacagtggaaacccctcctatgtcctctgtgaacctgctggaa
ggacttagcaggactgtggtctacatgacccttaatcaacttgtaagcttgatcactttt
gcacggcatgtaaggtcaggggagctgctgagagacgaggacaagatggctttggagaac
cttattattaatgttcctcaaaccagaacagggaagagcaatagccttgaactgactccc
tccagcacaccccagctgtctcctgcaagtaccccagccaacaaaaagaatcgactgcaa
ataggacaacaattagcagccattaccgcctgggacacctccgctacaaatctgaccgct
catattccccttgtaactccgtttgctggaaggaaccgaaaccggacaaatgaagcaaaa
gatcaacactttgaacatgaaagttcaactcaggagcccgtacaggaggtccagcctgaa
gaagtattggtcatttcactgggtattacatcacagatgtcaccaggcatgatgtcagaa
aatgaggtgttgagcatgcagcttgctgagagtgggcagggagaagtgcctgtagaggat
ggaaaactgcatggcaaaccagataaaactctgcgtttttccctctgcagcgataatctg
gagggaatatcagaaggaccttcaaaccgctcaaactctgtttcctcactggatctggaa
ggggagtcagtctctgaactaggagcaggaccttctgggagtaatggtgttgaagcttta
cagctgttggaacatgaacaagccacaacgcaagacaatctcgatgacaaactccgtaaa
tttgaaattagagacatgatggggctgacggatgacagggacatttcagaaactgtgagt
gagacctggagcactgatgtcttgggaagtgattttgatccaaacattgatgaagaccga
ctacaagatattgcaggtgctgcagcagagagcatgctgggtagtttgcttggtttacca
ggttcgacttcagtattgcttgatccctgcacaggatcaacgatctccgagacaacgagt
gaggcctggagtgtggaggttctgccaagtgactcagaagccacagatttgaaacaggag
gagcgtttgcaggagctggaaagttgttcaggattgggtagtacatctgatgatactgat
gtgagggaagtgagctcaaggcccagtacacctggactcagtgttgtatcaggcttttta
cactatttaacaggcatcagtgtaacttcagaagatatacccaacaaggtggaggatata
cggtcagagtgcagctccgattttggagggaaagattctgttacaagccctgatgtggag
gaaattgtacagggtgcacatcagatgacatcttcacttccccacacagacacgctactt
gccatgtttgaccccctgtcttctgatgcttcaatcataccatcaatagtcagacctaaa
gtacactatgcaagaccatcacacccgccaccagatcctccaatactggaaggtgctatc
ggaggcagtgatgcccgattaccagcatttgggtctcatatatgttgccaaactgaagct
gagctgctcaaacagagacactcctttccagaaagactagtgcgcagcagaagctctgat
attgtttcttcttctcgccgaccaatgagtgatcctggctggaatgcaccaggcagcaga
cggatggcaaatgaggaactatatgcagctggggcagcgcctgtaggagcctctggacca
acttcatctccaagcaaagattccctaggggaggatagaaaggacagcgatgatgagaag
tcagatcgtagcaaatcctggtggaagaaacgatttgtgtctgctattcctaaagctcct
atttccttcaggaagaaagataaacaagaaaaagacaaagaagatggtgcacaggaaagg
tttcaggccatgcaaggttggctgatcctaccttacataacgaatgatgagccaattccc
aagttgaatgcacaggctcaagccgctgaggatatcctggataaatatagaagtgctatt
aaacgagccagccccagtgaagcagttggcaatgatgaggttacagaggctattggagat
gacagcatgcatgattcgccacgtgatgaaactcttcaaaacctttcagccgatgatctg
ccagattctgccagccagactgcacagaatcaagactccacattctcctttagagatgca
aagaagaaattgcgaatggctctgtgctctgctgattcaattgcattccccctagtgagc
cattcagcaacaagaaatggccctcctggaggacctgatcaaggagaattagaagacaat
gagattgtctgctttctcaaagttcagctggctgaagccatcaacttgcaggataagcac
ctgatggcacaaattcaggaaaccatgcgctgtgttggcagatttgacagtagaacctgc
cacaagttactagctgccattgctgaggattacagaaaccgggctccatatattgcttac
ttgacacgatgccgacagggacttcagactactcaggcacaccttgaaagactcttacaa
agagtgttgcgagacaaagaggttgccaacagatacttcactacagtctgtgtaagacta
ttgctagaaagcagggaaaagcatattctggaatttattaaagattttcagaatctcact
gcagcagatgacaaaactgccttagtggaagaattcctgcagtcattatacggagctatg
gcacaagatgttatctggcagaatgccagtgaagaacagctccaggacgcgcagatggca
atcgagcgcagtgttatgaaccgcattttcaaactcgccttctaccccaatcaggatggt
gacattttacgtgaccagcttttctatgagcacattcagcgtctatgtaaagttgtcagt
gcaaatcaccgggcacttcaaattccagaggtgtatttgaaagaagctccatggccatct
gcacagtcggaggttcgaacaatcaatgcatacaagaccccgagagataaggttcagtgt
atcctgcgaatgtgctccaccataatgaatctgttaagcctggccaatgaggactcagtc
cctggggcagatgactttgttcctgttcttgtgtttgtccttatcaaggctaacccaccc
tgcctgctgtccactgttcagtacataaataatttctatgccagccggctcggtggagaa
gaatcctattggtggatgcagttcacagcagcagttgaattcattaaaaccattgatgat
cgcaagtga
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